UFO01147.5prime Sequence
1225 bp (1042 high quality bases) assembled on 2008-07-09
> UFO01147.5prime
TCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTC
GACATGGACAGCAGGGAGGAGAACGCCGTGTACGATGACATGAACCTGTA
CATCGCACCGCAGAGCTTCATCATCGAGCCGAATGGAGGAGATGAGTTGC
TGGTCATCGGGCGCCACGACAAAGTCACCAGGGTTCAGCCAGCGAGCGGA
GGTCTTGTGGCCAACCTTCGCCCCACCAGGAGGATTTGTGGTGTGCTGGG
AACCATTCACCTACTGAGCTGCGACTACCTTCTGGTGGCGACCCACCGCC
TCTTCGTGGGCGTGCTCAATGGCGCAGTTGTGTGGAGATTAGCGGGCTAT
GACATCATACCTTACATTCCGAATTCCTTCCAGCGCAAGGAGAACGAAAA
CTACTTGCGACTGCTACGCCAGACACTTGACACCAAGTTCTTTTACTTCT
CCTACCGCTACGACCTTACCAATTCGCTGCAGCGACAGCGGGAGGTGGCA
CAATCGCGGCCTGAAGTATCCGGGTTGCTCCAGCGCGCTGAGCAGCGATT
CGTTTGGAATGGCTATGTGCTGCGGCAGTTCAACTGCGATAAGATGGAGA
AGTTCCAGCTGCCACTCGTCCTGGGCTTCGTGTCTATCAACCAGGTGCAG
ATCAACGGGCAGACATTCTTCTGGAGCATCATCACCAGGCGTTCCGTGCA
GCGGGCGGGCACACGGCTCTTCTGCCGAGGCAGCGACGAGCAGGGCCATG
TTGCGAACTTCGTAGAGACCGAGCAAATAGTGGAGTTCAACGGGCAGCTG
ACTGGATTCGTGCAGACACGAGGCAGCATGCCCTTCCACTGGCACCAGCT
GCCCAATTTGCGCTATAAGCCACGACCCGTTCTGGTGCCCGGGCAAGGAT
CATTTGGCCGCCTGCGGGCTCCACTTTAAGACAGATCCGGCTGTATGGCA
CATGTGGCTGTGAATCTAGTGATCACAAAGGTGCCGAAGCGAGCTCGAGG
CGACCTATGCCCGCCTGGTCGAGAATGGAAATCCACAGTGCGATACGAGT
CTTTCGACTCCACAGCGAGTGCGTAGATGCGCTGGACTGACTGACTACTC
ATCGATCGCCCTCGCCCATGAACAGATCAGTCGGGTGTCTATCATTCCTC
CGAGCACGCAATGCGGTCCACGCGTACCTGGGGTCTTCGACGAAATGGAA
TCGCAAGTTGTTCTCTCTAAGAGAG
UFO01147.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sac1-RB | 2327 | CG9128-RB | 166..1273 | 53..1145 | 5010 | 97.8 | Plus |
| Sac1-RA | 2365 | CG9128-RA | 204..1311 | 53..1145 | 5010 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1248290..1249319 | 53..1072 | 4630 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:16:26 has no hits.
UFO01147.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:01:38 Download gff for
UFO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 205..1325 | 53..1158 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:26 Download gff for
UFO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1324 | 53..1158 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:56 Download gff for
UFO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1324 | 53..1158 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:56 Download gff for
UFO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1248293..1249410 | 56..1158 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:26 Download gff for
UFO01147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1248293..1249410 | 56..1158 | 97 | | Plus |
