UFO01149.5prime Sequence
1199 bp (1022 high quality bases) assembled on 2008-07-09
> UFO01149.5prime
TCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTC
GACATGGGAACCTTGGGCAATCAGTTCATCCTCTCGCGGGAGCGTCGCCG
GTTCGGGAGGCAGTGCCTCTTCACAGACCGCAACGAGATGATCCTCAGTG
TGCAGCCGAGTGGACGGTTGCGCCTCAAGTACATACTGCGCAATCCGATC
AACGAACGGACCCAGCTGAGCGAACAGTATGCAGCATCTTCAGTGTTGAC
ACACAACGTGACCCTGGATTCCCATGGCTTGAATCACTACGAAGGCGGCT
GGAACGTCAAGGAGGTGAACATTATGGACGAGGAGTCCACAATGCGCTAT
CGCAAAAAAGTCGAGCGTGATGACTCCTGGGGCATCGAGGTGAACCAATT
GATGCACGCCGCAATGGACATCAGTTCGGCCAACAATGCTGTCAACATCT
ACGAGGACTTCTTTGTGGATCTACCGGAGGATTTGGGCCGCGGCATCAGC
ATGAAGATCGCTGCCAGGGGTACCCATGTCTTTCATGATCTGTGGATCCC
ATCGCGTAGGCTGATGACGTGCGAATGGCTAAACAACGATCCCAATCAGT
TTCTCCTGTTCTATTCCAATCGAATGAGCCTGACACCGGACTACACAAAA
CAGCTAAACACGCTGCCCGATTTTGGCAACGATAATCCGCATGCATTCTA
CATTTGGAACTTGGATGATGCCACCCGACCGGCTGCCCATTACGATTCTA
GGAGAGTCGTACGGGTTGCCAAGGTGTGCCTGCGGGATGAGAGCTACATG
GTGGGTGGACTACAGGAGGGTCAGGTCGGCTTCTGGCTAACCGAGAACCA
GGGTGGTCCCGAGAGCATGTGTCCCCTGGGAGGCGTGTCATCGCGAGGCC
ACAACGGTCATCTGCTGGGTGCACTCGAAACTCACACTGAGTTTTACTCA
GGATCACTGGATGGGTTCATCAGGTACTGGGATACCGGGATTTTCTTATG
CCGGTTCATGAGGTGCTGGCCGAACGGACCCAGAACAGTTCAAAATCGCA
GGATGCACATGGCGTACTTTTTCTCCGAGTCCGAGTACCATAACAGTGCG
CCTTATATTCCTGCACGAATTGGTACTGTTCGTAGGCCATGCCAGCACAT
CGAGGAATACTATCGTGCTGCATTCAATTTTTGGCGCGTTCCATTGCCT
UFO01149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10859-RB | 1989 | CG10859-RB | 24..1115 | 54..1137 | 4925 | 97.4 | Plus |
| CG10859-RA | 2209 | CG10859-RA | 244..1335 | 54..1137 | 4925 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13397360..13398421 | 1110..54 | 4710 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:14 has no hits.
UFO01149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:04:31 Download gff for
UFO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1281 | 54..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:30 Download gff for
UFO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1281 | 54..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:40 Download gff for
UFO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1281 | 54..1088 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:40 Download gff for
UFO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13397405..13398421 | 54..1066 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:30 Download gff for
UFO01149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13397405..13398421 | 54..1066 | 98 | | Minus |
