UFO01151.5prime Sequence
1213 bp (1077 high quality bases) assembled on 2008-07-09
> UFO01151.5prime
CGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACA
TGACACCTAAGTCGATCCAAGATGACACCTATGTGGAGCAGTTCATGAAG
TACAACCTAAATGTCATGCACCAAATGACTAACTTCACTACAATGGTAGC
GAAGAGCACGACCAGATCCCGCACGCGGTCTAGTGTTCGGGCCGGAATAG
GCGGCAATAAGCAGTCCATTGACGACCTGATGAACGGGATACTTTATGAA
ACTATTAACTGGGAACCGTACAGCACTGTTGAGGCTCTCGAAGAGGCGTA
CGAGCCAAAGCCGTATACCAAGTCCTTTTTAAAGATCACCTTACGCAAGT
CTGACTTCTTCGAAATTCACAGCCAGACGCAGACGACGGTGGCCAAGGGA
TCGCCCGAGGGCGACGATGCGGAGCGAGACAACCGAAACTACGAGTATCT
GACAATAGGGAAAGGCAAAATTCGCCGGCGCTCAGACAATGACGCTCAGA
CAGATACTCTGCTCTTCACCACTCGGGCAGTCAACACCATCCTCATAACC
AAGGCCACCGTCAGCTCTTACGTTTCCAACTTTGAGATGTACGACACGCT
GAACAATATCACCAAGGAGTTCGCAACAGCCACTATGAGTTCGGTAAAGG
ACCTGACCTCGGCTCTAGCGCAGACGGAGGATGCGGATACCTTTGAGGAC
GACGAGGCCGTTGCCGAAAAAGACAAGGTCAGCAGCCAGATAGAGCGCCT
GTTCCGGAGCCCCGAGTTTCGCAACGCCATCATGTACATGGGCCGCACGC
TCTCGAGCAACACAAACGAGGCGGGGTTACGACGCTTCCGTAACTTTGAC
CAGGTGGAACGCTGGAACGCGGAGGCCGAGTACGTCTACTCGATGAACTT
GCTCTTTCGGCTGGTACCGGAGCCCAGCAAAGACGAGCGCAAGCCGTAAG
CGACATTGATTTCTGCCGCAGCAATGGTGACATCCTGGCTGTAGCCTACG
GACTGTACTCATTTTCCTCACAGCACGTACCGACTCGGCAGCGTTTCTGG
TGGAGCATAAAATCAGGCGAGCGGAGCGCGCAAAACTACTACGATGTGCA
GTACGGCAATAAACTTCCTCGCATCCTGCCATCATGCTCGCCATGTCCTG
TACAACGCAGCGTGATTGCGAAATGTGAGACAGTTGACAGAGGACACAAC
CCGGGTGGTGGGC
UFO01151.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RB | 2642 | CG7051-RB | 459..1608 | 50..1185 | 5135 | 97.4 | Plus |
| Dic61B-RA | 2616 | CG7051-RA | 433..1582 | 50..1185 | 5135 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 150994..151791 | 1034..238 | 3940 | 99.9 | Minus |
| 3L | 28110227 | 3L | 151848..152036 | 238..50 | 945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:39:46 has no hits.
UFO01151.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:04:32 Download gff for
UFO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-RA | 427..1526 | 44..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:47 Download gff for
UFO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 427..1526 | 44..1133 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:42 Download gff for
UFO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 427..1526 | 44..1133 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:42 Download gff for
UFO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 151848..152042 | 44..238 | 98 | | Minus |
| 3L | 150886..151790 | 239..1133 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:47 Download gff for
UFO01151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 151848..152042 | 44..238 | 98 | | Minus |
| arm_3L | 150886..151790 | 239..1133 | 98 | <- | Minus |
