Clone UFO01175 Report

Search the DGRC for UFO01175

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:11
Well:75
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptbib-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO01175.5prime Sequence

1213 bp (1048 high quality bases) assembled on 2008-07-09

> UFO01175.5prime
ATCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGT
CGACATGGCCGACGAAAGTCTGCACACCGTGCCCCTGGAGCACAACATAG
ACTACCACATCGTGACGCTATTCGAGCGCCTGGAGGCGATGCGTAAGGAC
TCGCACGGCGGTGGCCACGGGGTCAACAATCGCCTGTCCAGCACCCTGCA
GGCTCCCAAGCGGAGCATGCAGGCTGAGATTCGCACGCTGGAGTTTTGGA
GATCCATCATCAGCGAGTGTCTGGCCTCCTTCATGTACGTGTTCATCGTC
TGCGGTGCCGCCGCTGGCGTCGGAGTGGGGGCCAGTGTGTCGTCCGTGCT
TTTGGCCACGGCTCTGGCCTCCGGCCTGGCGATGGCTACACTGACGCAGT
GCTTCCTCCACATCTCGGGCGCCCACATCAATCCCGCCGTAACCCTGGCT
CTATGCGTAGTGCGATCCATATCTCCGATCCGGGCTGCCATGTACATAAC
CGCACAATGTGGCGGAGGAATCGCCGGAGCTGCTCTGCTTTATGGCGTAA
CTGTGCCTGGTTACCAGGGGAATCTGCAGGCCGCCATCTCACATAGCGCT
GCTCTGGCCGCCTGGGAAAGATTCGGTGTGGAATTCATCCTCACCTTTCT
GGTGGTTCTGTGCTATTTCGTATCCACGGATCCCATGAAGAAGTTCATGG
GCAATTCGGCCGCCTCGATTGGATGTGCTTACAGCGCCTGCTGCTTTGTG
TCGATGCCGTACCTGAATCCAGCCCGCTCCCTGGGTCCTTCGTTTGTGCT
TAACAAATGGGACAGCCATTGGGTGTACTGGTTCGGACCACTGGTGGGCG
GCATGGCCTCTGGCCTGGTGTACGAGTACATCTTCAACTCGCGCAACCGC
AACCTGCGCCACAACAAGGGCAGCATCGACAACGATTCCAGTTCGATTCA
CTCGGAGGACGAACTGAACTACGACATGGATATGGAGAGCCCAACAAGTA
TCAGCAGTCGCAGGCACCTACCCGCGTGTAGTCATGCAATGGCGGAGGAC
GCGCCAATGGTCAGCACAAGCTGCACATGGGCCAAATGCTGCGTATGTCA
ATGCCGTCAGGCAATACTGCAAATCTGTAACCTGTCTCGCGCCTCCCGAA
TAGAATCAGCACGACCTTGTAACGGGTGAAGCCGCCTCACAGTAAACGTG
CGCGCCGTTGGCT

UFO01175.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:49
Subject Length Description Subject Range Query Range Score Percent Strand
bib-RB 3276 CG4722-RB 302..1356 51..1089 4905 98.3 Plus
bib-RA 3276 CG4722-RA 302..1356 51..1089 4905 98.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9993266..9993543 753..1028 1290 99.3 Plus
2L 23513712 2L 9992254..9992462 545..753 1045 100 Plus
2L 23513712 2L 9984946..9985146 51..251 1005 100 Plus
2L 23513712 2L 9986787..9986956 250..419 850 100 Plus
2L 23513712 2L 9987600..9987727 418..545 640 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:52:47 has no hits.

UFO01175.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:03:29 Download gff for UFO01175.5prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 292..1354 43..1089 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:07 Download gff for UFO01175.5prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 294..1356 43..1089 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:31 Download gff for UFO01175.5prime
Subject Subject Range Query Range Percent Splice Strand
bib-RA 294..1356 43..1089 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:31 Download gff for UFO01175.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9984944..9985146 50..251 99 -> Plus
2L 9986789..9986955 252..418 100 -> Plus
2L 9987601..9987727 419..545 100 -> Plus
2L 9992255..9992462 546..753 100 -> Plus
2L 9993267..9993618 754..1089 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:07 Download gff for UFO01175.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9984944..9985146 50..251 99 -> Plus
arm_2L 9986789..9986955 252..418 100 -> Plus
arm_2L 9987601..9987727 419..545 100 -> Plus
arm_2L 9992255..9992462 546..753 100 -> Plus
arm_2L 9993267..9993618 754..1089 94   Plus