UFO01184.5prime Sequence
1217 bp (1042 high quality bases) assembled on 2008-07-09
> UFO01184.5prime
TGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGA
CATGAGCAGATTGGGCTTTGAGCAATTCCCGGACTACCAGGTGCCCGGCA
TGAAGCATCCTGATTTCTCGCCCTACGAGTCCAATGGCGGCTCCATTGTG
GCCATCGCCGGAGATGACTTTGCCGTAATTGCAGCGGACACCCGCCTGAG
CAGCGGCTACAACATTCACTCGCGAACGCAGAGTAAACTCTTTAAACTCT
CGCCCCAGACAGTGTTGGGTTCCGCAGGCTGCTGGGCGGACACGCTCTCG
TTGACCGGATCGATTAAGGTGCGCATGCAGAGCTACGAGCATACCCATCT
GCGCACCATGACCACTGAGGCCGTGGCCCAGATGCTCTCCATCGCCATGT
ACAATCGCCGCTTCTTCCCGTACTACGTGTCGAACATTCTGGCTGGAATT
GACAACGAGGGCAAGGGCGTCGTCTACTCCTACGATCCCATCGGTCACTG
CGAGAAGGCTACATACCGCGCCGGCGGCACTGCCGGCACCCTGCTGCAAC
CGGTGCTGGACAACCAGATTGGTCACAAGAACATGAATTTGGAAGACGCC
GACAAGATCAAGTTAACCAAGGAGCGGGCCGTGAGCGTTGCCTCCGACAC
CTTCATCTCTGCCGCTGAGCGCGACATCTACACCGGCGACTCTGTGCTGA
TCAACATCATAACCAAAGATGGAATTGAAGTACGAACTCTGACGCTGCGT
CAGGACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAATTACGCCCGCCC
TGCCACTCATCGCAGTACTGTGTAATCATAGCATTCTGCCGACATGGAGC
CATCAAAACGCATGATGACTGATCGCAGGCGGCATCAGCACCTTGTCCGC
TTGGCGTATAATATTTGGCCATGGGTGAAAACGGGGGCGAAGAAAGGTGT
CCAATGGCAGTAATCGAACTGGGTGAACTCCCAGGATGGCCTGAAACCAA
AAACCATTTCTCTTCCC
UFO01184.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta6-RA | 944 | CG4097-RA | 99..805 | 50..756 | 3535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16609539..16610155 | 756..140 | 3085 | 100 | Minus |
| 3L | 28110227 | 3L | 16610230..16610320 | 140..50 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:39:01 has no hits.
UFO01184.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 14:59:18 Download gff for
UFO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pros26-RA | 96..812 | 44..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:15 Download gff for
UFO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta6-RA | 93..809 | 44..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:19 Download gff for
UFO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta6-RA | 93..809 | 44..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:19 Download gff for
UFO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16609535..16610154 | 141..762 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:15 Download gff for
UFO01184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16602635..16603254 | 141..762 | 99 | <- | Minus |
