UFO01185.5prime Sequence
1219 bp (1072 high quality bases) assembled on 2008-07-09
> UFO01185.5prime
TCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTC
GACATGTCGGATCGCAAGGCGGTGATCAAGAACGCTGACATGAGCGAGGA
GATGCAGCAGGACGCTGTTGACTGCGCCACCCAGGCCCTGGAGAAGTACA
ACATCGAGAAGGACATCGCCGCCTTCATCAAGAAGGAGTTCGACAAGAAG
TACAACCCCACCTGGCACTGCATCGTGGGCCGCAACTTCGGATCCTATGT
GACCCACGAGACGCGCCACTTCATCTATTTCTACCTGGGCCAGGTGGCCA
TTCTGCTCTTCAAGAGCGGTGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAAT
CGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGG
TGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAA
CTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAAT
AAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTT
GCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAG
AGCGATGAAAACGTTTCAGTTTGCTCATGGAAACGGTGTAACAGGGTGAA
CACTATCCCATATCACCAGCTCACCGTCTTTCATGCCATACGAAATTCGG
ATGAGCATTCATCAGGCGGGCAGATGTGAATAAGGCGGATAAACTTGTGC
TTATTTTTCTTTACGGTCTTTAAAGGCGTATTCCAGCTGACGTCTATTAA
GGTACGTGGAGCCACTGACTGATGCCTCAAATGTTCTTTAGCAAGCATTG
GAATATCACGGGTACAATTCAGGTAATTCTTTTCCCATATTTGAGGCCTC
TCTCCCTTTAAGCCTCCTG
UFO01185.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdlc2-RC | 671 | CG5450-RC | 152..418 | 54..320 | 1335 | 100 | Plus |
| Cdlc2-RB | 621 | CG5450-RB | 102..368 | 54..320 | 1335 | 100 | Plus |
| Cdlc2-RA | 675 | CG5450-RA | 156..422 | 54..320 | 1335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1344616..1344882 | 54..320 | 1335 | 100 | Plus |
| X | 23542271 | X | 4698295..4698455 | 160..320 | 430 | 84.5 | Plus |
| X | 23542271 | X | 4691737..4691845 | 54..162 | 305 | 85.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:27:39 has no hits.
UFO01185.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:20 Download gff for
UFO01185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdlc2-RA | 126..406 | 44..324 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:15 Download gff for
UFO01185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdlc2-RA | 145..425 | 44..324 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:06 Download gff for
UFO01185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdlc2-RA | 145..425 | 44..324 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:02:06 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:42:15 has no hits.
