UFO01191.5prime Sequence
1178 bp (1020 high quality bases) assembled on 2008-07-09
> UFO01191.5prime
TCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTC
GACATGCAGTTCCTCCGCGTGGGTGGTCGTATAACGGCACTGCGTCAGAG
ATTGACCGATCGAATTCAGATGCCGGAGCGCTTCAAGGGCACGTTCGTGG
AGAAGTGGGTGCAGTATTGGAACGGCCTGGTCAGGGACTACACAGAGGTG
GCAGTGGGTGTTGTGCGAGAATCCTACACGAAGCCGAAAAAGGCGCTTCT
CTATGGAACGGGAATGCTGTTCATGTACCAAGCCAATCTGAAGAATCCCG
GCGAGGAGGCCTTTATGACTCTGCTAAGGGGTGCCACAAATCGAATGATC
ACAGTGCCGGTAGAACTTCAGAATCCCGTGTCCGCCGACTATCTGCTAAC
CTTGGAGAGGGCGATCAATCAAAAGAAACTGCGTCTCCTTTCTCTCGGCA
TCTGCACGATCCTTTGGGTGGATCTATACGACGAGGACGACTGCACCTAT
CCGGCCATCTGTGAATATACCAACGTGGGCGTCTTCAACTTCCACGAACG
GATCATCGATGTGGGATTTTGGAATCAATACTGGCGACTCAAATGGAAGA
TGCGCAACTATGATGTCAACTACCTGGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCATCACAAACGGCATGATGAACT
GATCGCAGCGGCATCAGCACTTGTCGCTTGCGTATATATTTGCCCATGTG
AAACGGGGGGCGAAGAGTGTCATATGCCACGTTTAATCAACTGGTGAAAC
TCACCAGGATGCTGAAACGAAAACTATTCTCATTATCGTAAGGAATAGCA
GCTTACGTAACGCCATCTTGCCATATTGGTCAACTGCGAATGCCTGGATA
CTCAGCGAGAGCGTCAGTGTCTCTGGAA
UFO01191.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14270-RA | 774 | CG14270-RA | 95..667 | 54..626 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3484712..3485284 | 626..54 | 2865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:44:46 has no hits.
UFO01191.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:03:34 Download gff for
UFO01191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 85..663 | 46..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:16 Download gff for
UFO01191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 89..667 | 46..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:53 Download gff for
UFO01191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14270-RA | 89..667 | 46..626 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:53 Download gff for
UFO01191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3484712..3485290 | 46..626 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:16 Download gff for
UFO01191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3378745..3379323 | 46..626 | 99 | | Minus |
