UFO01196.5prime Sequence
1050 bp (996 high quality bases) assembled on 2008-07-09
> UFO01196.5prime
GCGGCCGCATAACATCGTATAGCATACATTATACGAAGTTATCAGTCGAC
ATGTATCTGGATACGAAAAACCTGACAGCCAGCAGCACTTCAGCACTGAC
AGCGGCCACAGCATCGAACTCAAAGTCAACACGGCGCATGCGTAACGTGT
GGAAACCGCTGAGTCGCCTACTGAAAGTGGGTGGCAAAGGTCGCACCGCA
CAGGCGACCTTGGCCCATCCCAACAACGTGGATCTCAACAACACACAGCA
GCAGCAACAGCAGCAGCAGCAGGAGTTGCTCATTGAAGATGACACCAAGT
CAACGCCAGAGGAGTCTATCCACAAGTACGGTCTGGAGCTGAGGCAATTG
CCCGAGGAGGAGCAGGTGTCCCTCACCCAGCCGCCCAACACACCCACATT
GATTAGCAGCGTGCATGTGGACAAGGTCAGCGCCCAGAGCTGCGGCAACT
GCCAACACGGACGCAACTGCCAGCATCGACATCACAGCAGCAGCAACATC
AACAGTAGCAGCAGCAGCAGCAATATGAACAGCAGCAGTGCAACACAGTT
GCCCAGTAATCTCTGGGATCTGCAGTTGCCCCTCCAATACATCAGCACGG
ACAATGGCACCTTCTTCTGGGCCAACACCCAGGATCGGGTGGACGATGAT
CTTCTGCACGCCTTGCTTTGCCAGAGCTTCAGTCAGCTGCCCGGAACGCT
CTGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCCACCGAGCGTTCTGAACAAATTCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAATATCAAATTACGCCC
CGCCTGCCACCTCATCGCAGTACTGTTGTAATTTCATTAAGCCATTCTGC
CGACTGGCAGCCATCCAAAACCGCCTGGATGAACTTGAATCGCCAGCGGA
UFO01196.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)m2-BFM-RA | 957 | CG6104-RA | 107..762 | 49..704 | 3265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26016709..26017364 | 704..49 | 3265 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:27:44 has no hits.
UFO01196.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:19 Download gff for
UFO01196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| m2-RA | 102..767 | 43..712 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:20 Download gff for
UFO01196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)m2-BFM-RA | 102..767 | 43..712 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:10 Download gff for
UFO01196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)m2-BFM-RA | 102..767 | 43..712 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:10 Download gff for
UFO01196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26016704..26017369 | 43..712 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:20 Download gff for
UFO01196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21842426..21843091 | 43..712 | 98 | | Minus |
