UFO01209.5prime Sequence
1236 bp (1034 high quality bases) assembled on 2008-07-17
> UFO01209.5prime
ATCTGCGGCCGCATAACTACGTATAGCATACATTATACGAAGTTATCAGT
CGACATGCTGGACGCTCTAATTCGGGCAGCGGAGCTTGTGGATCTGGTCC
TGCTGCGTCCGCTGGCCAGCGTGATTGATGCAGTGATTACTGGCGTGTAC
TACTTCCTGTGGGGCAGCTACCTCGTCGGCTTCTGTTTGGTGGAGGGCAG
CAGGAAAGGATGGAATCTGTTGAGATGCGCGGTCAGGAATATCAACGAGG
GCATCCGCGACTTGGGCCTCATCACGCTAGATGTGGCGGACTACTTCTAC
GGCGGCACCAAAGGCGGGCTCAAGAATGTACTCGATTTTGGTCACTGCAT
ATCCCGATTCATCTGCAACTTACTCATCGATCTGGGTGATGGCATCTTGT
GGCTGCTGATGCTGCTGCCGAGGGCCATACTATTCCTCTGGGACTGCCTC
CTAGACTTTGTGGTGCACTCAATCGTGGCCCATGGCTTGAGCTTGCTGAA
CAGTGCGTTCCGGGCCTCGATAGGATTGGCCCTGCTCCTCGTTCTCTATA
TGTTCCGCCGCTATGTGTACCTGATGCTCATCTACCTGCTGCAACGTGGA
CGCATTGAAATCTCGACGAAGACGCAAAGCGTTTACCTATGGACCCATCA
TAAATTGCAACACTTCATACACAATGTTTGGTATGTGTCAGAGAACGCAG
GATCCGCGAGTCCAGAACGCTGTGTCGTGTGCATGGCTCAAAGCAGGAAC
GTAGTAGTCATGCCATGCCGGCACCTCTGCCTCTGCAAAGAGTGCTCCCT
GCAGCTCGTGCTCCTTTTAGAAGACCGCTGTCCTGTCTGCAGGCACAACA
TTACGTCGTTCCTGTCAGTTTACGTTGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGCATGACTAGTGCTTGGATTCTC
ACAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGTGTGTCCAGAATGG
AGTTCTGGAGTCATTACTGGATCTATTCACAGGGAGTCCAAGGCGAGCTC
GATATTCAAATTACGCCCGGCCTGCCATTATCGCAGTACTTTTTGTAATT
CATTAAGCCATTCCGCGAACTGAGGCATCAAGCGCATGGATATAACTGAT
CGCCAAGCGCCATCTCGAACACCTTGTGTCGTCGCC
UFO01209.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2617-RB | 1062 | CG2617-RB | 81..903 | 54..876 | 4115 | 100 | Plus |
| CG2617-RA | 1262 | CG2617-RA | 81..903 | 54..876 | 4115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20682448..20683270 | 54..876 | 4115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:25:47 has no hits.
UFO01209.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:30 Download gff for
UFO01209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2617-RA | 78..903 | 51..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:23:33 Download gff for
UFO01209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2617-RA | 76..901 | 51..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:15 Download gff for
UFO01209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2617-RA | 78..903 | 51..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:15 Download gff for
UFO01209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20682445..20683282 | 51..891 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:30 Download gff for
UFO01209.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20682445..20683282 | 51..891 | 98 | <- | Plus |
