UFO01211.5prime Sequence
1221 bp (1049 high quality bases) assembled on 2008-07-17
> UFO01211.5prime
GCGGCCGCATAACATCGTATAGCATACATTATACGAAGTTATCAGTCGAC
ATGAACAAACTGAAATCCAGCACGCACCGCGATAAGGTGAAGAAGTTCAT
ATCGCTGACACACACGGGGGAACAGACGGCAATATTCTGTTTGCAACAGA
ACGACTGGAAATTCGAGTTGGCCAGCGACAATTACTTCCAGAATCCGGAG
TACTATTACCGGGAGTTGGATCGCAAGCGCATCGAGCAGCTATTCATGCG
CTATCGGGATCCCAGTGATCCCCTAAAGATCGGATCCCAGGGCGTAATCC
ACTTCCTGGAGGACTTGGACCTGAAGCCAGACTCAAAACTGGTGCTGATC
ATAGCGTGGAAATTCCACGCCGAGGTGCAGTGCGAGTTCTCGCGTGATGA
GTTTATCAATGGCATGTGCGACCTGGGCATCGATAGCATCGACAAGCTAA
AGACCAAGCTGCCCATCCTTGAGCAGGAGCTGAACGACGCCGGCAAGTTC
AAGGACTTTTACCACTTTACCTTCAACTACGCCAAGGATCCGGGGCAAAA
GGGCATTGACCTGGAAATGGCAATCGCCTACTGGTGCATCGTTCTTAGTG
GGCGCTTCAAGTTCTTGGACATCTGGTGCCAGTTCCTCGAGGAGAAACAC
AAGCGGGCCATCTCGCGAGATACGTGGAACCTGCTGCTCGACTTTGCCAC
CAACATCGACGACCGGATGAGCAACTACGATTCGGAGGGCGCCTGGCCGG
TTCTAATAGACGACTTTGTGGAGTGGTGCCAGGAGAACGATCATCTCAAG
GAGGACTCCTCGCCGGCATCCGGCTACCAGCAGCAGTCCAGTGCTAGCTC
CAGCTCCCAAAAGAACATATCCAGCGCCTACCAGACCTCGCACAGTACAA
ACATGAACTATGGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATATCACACTGTCT
TAGGAGATCCTGGTTCATGACTAGTGCTTGCATTCCTCACCAATAAAAAA
CGCCCGCGCAACGAGCGTTCTGAACAATTCCGGATGGAGTTCTGAGTCAT
TTACTGATCTATCAACAGGAGTCAGCGAGCTGGATTCCAAATTACGCCCG
CTTGCACTCATCGAGTACGTTTGTATTCATTAGGCATCTGTGCCGCACAT
TGGAGCCCATACTCACAAAAC
UFO01211.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7427-RE | 1226 | CG7427-RE | 213..1076 | 51..914 | 4320 | 100 | Plus |
| CG7427-RA | 1601 | CG7427-RA | 301..1164 | 51..914 | 4320 | 100 | Plus |
| CG7427-RD | 1472 | CG7427-RD | 461..1322 | 53..914 | 4310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15564261..15565122 | 53..914 | 4310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:09:35 has no hits.
UFO01211.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:37 Download gff for
UFO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 294..1167 | 43..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:20:20 Download gff for
UFO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 283..1156 | 43..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:37 Download gff for
UFO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 294..1167 | 43..918 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:37 Download gff for
UFO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15564242..15565125 | 37..918 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:37 Download gff for
UFO01211.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15557342..15558225 | 37..918 | 98 | == | Plus |
