UFO01231.5prime Sequence
1181 bp (1051 high quality bases) assembled on 2008-07-17
> UFO01231.5prime
CAGATCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATC
AGTCGACATGTCCGACAATACCGAGAGCAAACTTGCGCTAGACCCGTGCG
ATGTGATCGTCTTTGAGGGACCATTCAACCGCTCGGTGAGCAGGAAGCTA
GTCATCAAGAACACCAGTAAGACCCAGCGAATGGCCTTCAAGATGAAGAC
CACCACTCCAAAACTTTTTTATGTACGCCCCAACATCGGTGTCTTGGGGC
CCGAGCAGAAGGTCAGCGTTGACATATTCATGCAGCCAATTCTGCAGGAG
CAGATAAAGAAGCGTCATAAGTTCCTTCTCCTGGCCGCCGAGGTGACTGG
TGACATAAGCGATGTGCAGGAGTTTTGGAAGATGCAGAACCCGAATGAAA
CTCGGGAAACCAAGATCAAATGTGAGCTAGTCCCTTCGAAGGAGGACGAT
TTCCGTCAGGCGGGAGGTTCAGCTGTAATATCCACGGACAACAAGGACGG
AGAGGTCCATTTTGATGCCCAGGAAGTCAGTGAGCCAATGGCCAAGTTGC
TCAAGCAAGTCAGCATGCTGGAGGACGAGCATATGGCCCTCACAGACCAG
ATCGACGGCTTGCGTGACCAGGCGATTGGGCGCACTTTCTTCTACATGGC
CGCCATAGTAATCATTATACTGTCCGCTGTCGCAGGCGCCTATTATGGCA
AGACTCGTTTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATAAGCATTCTGCC
GACATGCAGCCATCACAAACGCATGATGACTGATCGCAGCGGCATCAGCA
CCTGTCGGCTGCGTATATATGCCCATGTGAAACCGGGGCGAGAGTGTCAT
ATGCCACGTTATCAACTGTGACTCACCAGGATGCTGAACCAAACAATTCT
AATAATCTGTAGAATAGGCCAGGTTTCACCG
UFO01231.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fan-RA | 912 | CG7919-RA | 147..800 | 58..711 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8109278..8109931 | 58..711 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:59:50 has no hits.
UFO01231.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:06 Download gff for
UFO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fan-RA | 147..806 | 58..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:23:36 Download gff for
UFO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fan-RA | 110..769 | 58..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:11 Download gff for
UFO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fan-RA | 147..806 | 58..719 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:11 Download gff for
UFO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8109278..8109937 | 58..719 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:06 Download gff for
UFO01231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8102378..8103037 | 58..719 | 99 | == | Plus |
