UFO01233.5prime Sequence
1224 bp (1043 high quality bases) assembled on 2008-07-17
> UFO01233.5prime
ATCTGCGGCCGCATAACATCGTATAGCATACATTATACGAAGTTATCAGT
CGACATGAAGCTGTCTATACGCATGCTGGACCAACGCACCATCACTTTGG
AGATGAACGAATCGCAGGAGGTGAGGGCTCTGAAGCAGAAATTGGGCAAT
TTACCCGAAGTCGCCATGCCCGCGGAGAACCTTCAGCTGATATACAGTGG
CCGCATTATGGAGGATGCCATGCCCCTCAGTGAATATCGTATAGCCGAGG
ACAAGATCATTGTGTTGATGGGTAAGAAGAAGGTTGATAAGAGCTCGCCA
GAGGAGAAGGTTGCCCCGACACCACCGTTGGCCGCTGGCCCAAATGTTTT
GCGCACAGAGGATGTGGTGCCTTCACTAGCTCCCAATGATCAGTGGGTGA
GCGATCTCATGTCAATGGGATATGGCGAAGAGGAGGTACGCTCAGCCCTC
CGGGCGAGCTTTAATCATCCGGAAAGGGCTATAGAGTATTTGATTAATGG
GATTCCTCAGGAGGTTGTTTCAGAGCAGGGATTAGCTGCAATCCCGAGCG
TACAGACAAGTGATCAATTGCAGCAATTAATGGCAGATCTTAACATTACA
CGGATGCGTGAGATGATTAATCAGAATCCAGAACTAATACACAGACTAAT
GAACAGACTGGCTGAAACCGATCCGGCTACCTTCGAAGTCTTTCAGCGTA
ACCAGGAGGAGTTAATGAACATGATTTCAGGCGGCGCAAGTCGCACCCCG
AACGAGATTGAACATTTACAGATTACTTTAACCGCCGAAGAAACCCGCCG
CCGTAGGGCGTTTGGGAGGCACTGGGTTTCGAACGTGTGATGGCCGTTCA
GGCCTATCTGGCCTGCGACAAGGACGAGCAGCTGGCCGCAGAGGTACTAA
TACGCCAGTCAGAAGGAGGATCGAGACGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATATCATATCAT
ATCACACTAGCCTAGGAGATCCTGTCATGACTAGTGCTTGATTCTTGAAT
AAAAACGCCGCGCACGAGCGTTTGAACAATCCAGATGGAGTTCTGAGGTC
ATTTCTGGATCTATCAAAGGATCAGCGAGCTCGATTTCAAATTTCGGCTG
GCCTGGCACCTCATCGCAAACGTGTGTGATTCATATAAGCATTTCGGCGA
CATGGAAAAGCCCATCTCTCAAAA
UFO01233.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10694-RA | 968 | CG10694-RA | 59..928 | 55..927 | 4290 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24107449..24108318 | 55..927 | 4215 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:15:14 has no hits.
UFO01233.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:02 Download gff for
UFO01233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10694-RA | 59..931 | 55..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:24:35 Download gff for
UFO01233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10694-RA | 59..931 | 55..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:13 Download gff for
UFO01233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10694-RA | 59..931 | 55..931 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:13 Download gff for
UFO01233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24107449..24108321 | 55..931 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:02 Download gff for
UFO01233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19933171..19934043 | 55..931 | 99 | == | Plus |
