UFO01234.5prime Sequence
1231 bp (1045 high quality bases) assembled on 2008-07-17
> UFO01234.5prime
GATCTGCGGCCGCATAACAACGTATAGCATACATTATACGAAGTTATCAG
TCGACATGGAGAAAATCGAGAAGGAACTTGAGCGCACGGAGCAGCAGCAG
CAGGAGCCGACGGAGCCGTCCAATGGCAATCTGGAGGAGCAAGTCCGCAA
GCTCAGGGATCACAATTTGCGGGTGAAGCATCTGAATACTCAGCGTCGTC
GCATCCTACGCCTGTTGCAGGGAAAGATGCTGCAGTATGCCACCCTGGAG
GAACGTTTGCACAGGATTGGCGAACTCGTTCTCATCGCAGAGCTCCATTC
GGGTGTGAAGACACTCAATCAGCGTCTGGACAGAATGGTGGAGAATTCAA
CTTGCTCCATTTGCCTGTTGCCCTGGACGGACAACGGAATACATCGCCTG
GTCTCGCTCCGTTGTGGCCATTTGTTTGGCTCCAGCTGCATCCACATGGC
CATTCGGCGCAATCATCGCTGCCCAATCTGCCGGCGACGGGCTCGCCACT
TCCACGTGCGCAGGATCTACAGTCCGAGCTTTTTGTCTCATGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCAATAAACCCTTTAGGAAATAGGCCAGGTTTGT
CGGTAACACGCCCACATCTGCGAATATATGTGTAGAAACTGCGGAAATCG
TCGTGCTATTCACTCCAGAGCGATGAAAACGTTCAGTTGCTCATGAACGG
GTACAGGGGAACCTATCATAACACAGCTAACGTCTTCATGCATACGAATT
CGGTAAGAGACATTTCTCTCAGGCGCGGGCG
UFO01234.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17329-RA | 665 | CG17329-RA | 59..544 | 56..541 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16291342..16291827 | 56..541 | 2430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:30:59 has no hits.
UFO01234.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:20 Download gff for
UFO01234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 47..549 | 44..549 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:29 Download gff for
UFO01234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 47..549 | 44..549 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:06 Download gff for
UFO01234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 47..549 | 44..549 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:06 Download gff for
UFO01234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16291330..16291827 | 44..541 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:20 Download gff for
UFO01234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16291330..16291827 | 44..541 | 98 | == | Plus |
