UFO01248.5prime Sequence
1226 bp (990 high quality bases) assembled on 2008-07-17
> UFO01248.5prime
CAACGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCTCGGAC
GACACCGATGAGTTGGACACCATCGCCGATGTGATGGGACTCCGGTCACA
GGCGCGTCTCAATACGTTTCGCGAAATGTGGTACCACGTCTTTCTGTGGG
CCCTGTTCTCCTCCATATTCATTCACACCTGCGCCGCCGTGGTGGCCTTC
TTCACGCTCCGGAAGCACAAGTTCGGACGATTCTTCTCGATCCTCATCCT
TGTCATGGGATTCCTTTCCCCGGCCTCCAGTGGCATCATCAGCAGTGCAG
TCATCGCCTTTGTGCATCGTGCCTCCAGTCTGCCCATGTCGCCCATATAC
GCCATGATCTGGGGCCTCGGCCAGACCATCGTCTCCGCCTGCCTGGGATT
CACCCGGATTCTGGCCACGCTAGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCA
ATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGGTAACACGCCACAT
CTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATCGCGCC
AGAGCGATGAAACGTTTCAGTTTGCTCATGGAAACGGGTGTAACAGGGGG
AACACTATCCCATATCACCAGCTCACCGTCTTTCATGGCCATACGAAAGT
CGGAAGGAACATCATCAGGCGGGCAAGAATTTCAATAAGGGCGGGAATAA
AACTGGGCCTATTTCTTACGGCCTTAAAGGCGTATATCCAGCTGAACGGC
CGTGTATTAGGGATACCATTGGAGGC
UFO01248.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12341-RA | 1100 | CG12341-RA | 507..891 | 38..422 | 1880 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10812366..10812750 | 422..38 | 1880 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:24:05 has no hits.
UFO01248.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:21 Download gff for
UFO01248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12341-RA | 507..897 | 38..428 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:20:08 Download gff for
UFO01248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12341-RA | 527..917 | 38..428 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:44 Download gff for
UFO01248.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12341-RA | 507..897 | 38..428 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:59:44 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:39:21 has no hits.
