UFO01255.5prime Sequence
1198 bp (1037 high quality bases) assembled on 2008-07-17
> UFO01255.5prime
TCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTC
GACATGCGAGCCTCCATTCCGCCCGGCATTCGAGTGGTGCGCGGACCCAA
CTGGATCTGGTCGAATCAAGACGACGGAGAAGGTCACGTTGGAACCGTTT
GCGAAATCGGACGTTGCGGATCGACACATTCGCCAGAAAACACTGTCGTG
GTCAACTGGGATTCCGGACACCGGACCAACTACCGTGTGGGCTACCAAAA
CCAGTACGACTTGATAATTGTAGATAATGCTCAAGTTGGAGTTCGTCACT
CAAATGTTGTCTGCGATGGCTGTTCCAAGGCGGGTATCGCTGGCATAGTA
TTCAAGTGCGCCCAGTGTCCCAACTATCACCTATGCGCCTATTGCTACGC
AGAGGATCTGCACGATATTGAGCACCCGTTTATCCGCTACACGACTCCCA
ACTCGCTGGGCGTGAGATTGCCCATGAGAAAAGGTGCCAAGCGCATCCAG
CTGCGAGGCATCTTTGTGGGTTCCAAAGTAGTGCGCGGTCCTGACTGGGA
GTGGAACGAACAGGACGGCGGAGAAGGCAGGACGGGTCGGGTAATGGAAA
TCCGAGGCTGGGACAACGAATCGTGTCGCAGCGTGGCCAACGTAGCGTGG
GTAACCGGATCGACGAACGTCTACCGTCTAGGTCACAAGGGAAACGTTGA
CCTCAAGTACATTACTGCCACGTGCGGTGGTCACTACTATAAGGACCACA
TGCCTGTTCTAGGTCAGACAGAGGAGTTGCAGCCGGTGGCGCCCATGGTG
AAGCCAAGCTTTTCCGTGGGCGACCGCGTCAAGGTTTGCCTAGAGGTTGA
CGCCCTAATGAAATTGCAGCAGGCCATGGCGGATGGAATCCGCGCATGGT
CGAGCATTTGTCCAAACTGGGCACAGTACACCGCATCACGGACAGGGGAT
ATACGTGTTCAGTATGAAACTGTCCCAATCGATGGACCTTCATCCCGCCG
CCCCTCGTTAAGTTGTCTCTTTTCGTGTCGGTGACCTGTCACATCATCAC
GATGCACAAAGTGCAGCAGCTGCAGAAGGTCACGGCGATGATAGAAATCA
TGCACACCGCCCTTGAAACTGGCAGTATGAAGGGTACTCGGACGGTACTC
GACCACAGTGACGACGCCTCGAGGGAACCTGATATCCGAAGGTGTCTC
UFO01255.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mib2-RC | 3805 | CG17492-RC | 236..1349 | 53..1146 | 4985 | 97.6 | Plus |
| mib2-RB | 3899 | CG17492-RB | 398..1511 | 53..1146 | 4985 | 97.6 | Plus |
| mib2-RA | 4164 | CG17492-RA | 595..1708 | 53..1146 | 4985 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19038084..19038745 | 288..948 | 3245 | 99.7 | Plus |
| 2L | 23513712 | 2L | 19037802..19037972 | 119..289 | 855 | 100 | Plus |
| 2L | 23513712 | 2L | 19035798..19035865 | 53..120 | 340 | 100 | Plus |
| 2L | 23513712 | 2L | 19038815..19038973 | 955..1103 | 245 | 88.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:55:41 has no hits.
UFO01255.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:23 Download gff for
UFO01255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mib2-RA | 588..1712 | 46..1154 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:31 Download gff for
UFO01255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mib2-RA | 512..1636 | 46..1154 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:27 Download gff for
UFO01255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mib2-RA | 588..1712 | 46..1154 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:27 Download gff for
UFO01255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19035791..19035865 | 46..120 | 96 | -> | Plus |
| 2L | 19037804..19037971 | 121..288 | 100 | -> | Plus |
| 2L | 19038085..19038754 | 289..955 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:23 Download gff for
UFO01255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19035791..19035865 | 46..120 | 96 | -> | Plus |
| arm_2L | 19037804..19037971 | 121..288 | 100 | -> | Plus |
| arm_2L | 19038085..19038754 | 289..955 | 99 | -> | Plus |
