UFO01267.5prime Sequence
1196 bp (1045 high quality bases) assembled on 2008-07-17
> UFO01267.5prime
ATCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGT
CGACATGGGTGCCAATGTGTCGCAGCTGGAGCGGGAGATTGGCTCCGATC
TGTTCCCACCGAATGAGCACTACTTCGGTCTGGTGAACTTTGGGAACACC
TGCTACAGCAACTCGGTGCTGCAGGCCCTCTACTTTTGCAAGCCATTCCG
CGAGAAGGTCCTTGAGTACAAGGCCAAGAACAAGAGGCCCAAGGAGACGC
TGCTGTCGTGTCTGGCGGATCTGTTCTACAGCATTGCCACGCAGAAGAAG
AAGGTGGGCTCGATTGCGCCCAAAAAGTTCATAACCAGGCTGCGAAAGGA
GAAGGAGGAGTTCGATAACTATATGCAGCAGGATGCCCACGAGTTCCTCA
ACTTTCTGATCAATCACATCAATGAGATCATACTGGCCGAACGGAATGCA
GGGCCCAGCAATGGGAATCCCAAGGCCACCAATCAAGGCGGAAGCACAAG
TGCCATGGCCAGCAGCATAGCTAGCAAGTCCAGCTCAACGTCCAACTCGA
ATTCCAACTCCAATTCGACAACAAACTCAAATGGCAACAGTAGCAATTCG
ACGGGATCACTGAATGCCAACACAAGTGTGCTGGATGCCAGTGGCAGTCT
TACGGCCACCACAACACCTATAATCTCAGGAAACGGAACGGGAACCAATG
GGGCCAACTCGGAGCCCACCTGGGTGCACGAGATCTTTCAGGGCATACTT
ACGTCCGAGACCAGGTGCCTCAACTGCGAGACGGTGAGCAGCAAGGACGA
GAATTTCTTCGATCTCCAGGTGGACGTGGACCAGAACACCTCGATTACGC
ACTGCCTGCGGTGCTTCAGCAACACGGAGACCCTGTGCTCGGACAACAAG
TTCAAGTGCGACAATTGCTGCAGTTATCAGGAGGCGCAGAGGAGGATGCG
TGTAAAGAAGTTGCCCATGATCCTGGCCCTGCATCTCAAGCGCTTCAAGT
ACATGGAGCAGTTTATAGCACATCAGTCTCGCATCGCGTTGTGTTTCCAC
TGGACTGAGCTCTTACACTCGATGATGCAATGATCTGATCGTCTCTACGA
TCTGACCGCTGTGGCTATCCCTGCCGTCGAACAATCTGGCATAATAATCC
ATGTAAGAGTCCGACTGTGGGACTTACATATTCGACGAGTGATATT
UFO01267.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Usp12-46-RB | 2208 | CG7023-RB | 787..1865 | 54..1120 | 5070 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22774953..22776031 | 54..1120 | 4870 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:32:29 has no hits.
UFO01267.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:23 Download gff for
UFO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Usp12-46-RB | 793..1882 | 51..1127 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:30:54 Download gff for
UFO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7023-RB | 793..1882 | 51..1127 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:39 Download gff for
UFO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Usp12-46-RB | 784..1873 | 51..1127 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:39 Download gff for
UFO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22774950..22776037 | 51..1126 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:23 Download gff for
UFO01267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18600672..18601759 | 51..1126 | 98 | -> | Plus |
