UFO01276.5prime Sequence
1211 bp (1037 high quality bases) assembled on 2008-07-17
> UFO01276.5prime
GATCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAG
TCGACATGGCAGTGGCATTCTACATACCCGATCAGGCGACTCTGTTGCGG
GAGGCGGAGCAGAAGGAGCAGCAGATCCTTCGCTTGCGGGAGTCACAGTG
GAGATTCCTGGCCACCGTCGTCCTGGAAACCCTGCGCCAGTACACTTCAT
GTCATCCGAAGACCGGAAGAAAGTCCGGCAAATATCGCAAGCCATCGCAA
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAG
TTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGG
ATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGG
CCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAAC
TGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTT
TGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAG
CTCACCGTCTTTCATTGCCATACGAATTCCGGGATGAGCATTCATCAGGG
GGCAGAATGTGAATAAAGGCCGGATAAAACTTGTGCTTATTTTTTCTTTA
CGGTCTTTAAAAGGCCGTAATATCCAGCTGACGTCTGGTTATAGGTACAT
TGAGCAACTGACTGAATGCCTCAAATGTTCTTTACCGATGCATGGGATAT
ATCAACGTACAATTCCAGTGATTTTTTCTCAATTAGCCTCTAGCTCTGAG
ATCCTAACTTCGTAAGCCATACTTTACGAGTTAGATACATTTATTGAGGC
CATTTTATCTA
UFO01276.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rpr-RA | 901 | CG4319-RA | 201..395 | 56..250 | 975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18398041..18398235 | 250..56 | 975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:10 has no hits.
UFO01276.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:54 Download gff for
UFO01276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rpr-RA | 196..403 | 48..258 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:28 Download gff for
UFO01276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rpr-RA | 164..371 | 48..258 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:10 Download gff for
UFO01276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rpr-RA | 196..403 | 48..258 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:01:10 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:29:54 has no hits.
