UFO01277.5prime Sequence
1199 bp (1057 high quality bases) assembled on 2008-07-17
> UFO01277.5prime
TCTGCGGCCGCATAACAACGTATAGCATACATTATACGAAGTTATCAGTC
GACATGCAGGAAGCAGAGACAGATCCAAAGCGAACTAAAAGTTACGTGGA
AGAAGTATTTCGCAAAGTGCAGGAGAAACCCGGCGTGGAGGACATATTGA
TCATGAATCACTCGGGTGTGCCGGTGAAAACCTCGATGGATCGTCAGGAG
GGCTTGCAGTACGCCTGTCTATATGACAATTTGCGGGAGAAGTGCCAGGC
GTTCCTCTCCAAAATGGAGCCAGCCCAAAATTTGACTCTACTGAGAGTTC
GTACCAAGTATCACGAGGTGCTCATTACACCAGATGCCAAGATCACCGTT
TTGGTGGTTCAGAATGCCAAAGATACTTTTCTTAACATAAAGGGTGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCG
CCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTC
CATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGG
CTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGG
TTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCG
GGAATCGTCGTGTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCA
TGAAAACGGTGTACAGGTGACACTATCCCATATCACCAGCTCACGTCTTT
CATGCCATACGAAATCGATGACATCATCAGCGGCAGATGTGAATAGCGAT
AACTGTGCTTTTTTTCTTACGTCTTAAAGCGTATATTCACTACGCTGTTA
GTCATGACACTGACTGGATGCCTCAATGTTTCCTTACACGAAGTTCCGC
UFO01277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10822-RA | 554 | CG10822-RA | 111..452 | 54..395 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19951528..19951848 | 75..395 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:26:54 has no hits.
UFO01277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:51 Download gff for
UFO01277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10822-RA | 104..459 | 47..404 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:30 Download gff for
UFO01277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10822-RA | 1..345 | 54..396 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:46 Download gff for
UFO01277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10822-RA | 104..459 | 47..404 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:46 Download gff for
UFO01277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19951528..19951848 | 75..395 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:51 Download gff for
UFO01277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15839033..15839353 | 75..395 | 100 | == | Plus |
