UFO01278.5prime Sequence
1175 bp (1041 high quality bases) assembled on 2008-07-17
> UFO01278.5prime
ATCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGT
CGACATGTCCGCGGAAATCGAGGATTTGCTGAAACGCTATCAAAACTACC
CCAATGTTTCTGGCATAATTATTTTGGACCCGTTCGCTATACCAATCAAG
ACCACCATGGAGTACACCTTGACCGTGCATTACGCGGCCTTGATCAGCAC
CTTAACTTATAAGGCGGCCAAAATGATTACCAATTTGGATGCCAGCAATG
AGCTGGTGACAATACGTCTGCGCACCAAGGTTCACGAGGTGATTGTGCTG
CCCTCCGAGAACTACATCATTATTGTAGTGCAAAATCCAGGCACCGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCG
CCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTC
CATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGG
CTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGG
TTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCG
GAAATCGTCGTGCTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCT
CATGAAACGTGTAACAAGGTGAACACTATCCATATCACAGCTCACGTCTT
TCATGCATACGAAATCGATGACATCATCAGCGGCAGATGTGAATAAGCGA
TAACTGTGCTTATTTTCTTACGGTCTTAAAGCGTAATTCAGCTGACCGAC
TGGTTTAGGTACTGACACTGACCTGAATGCCTAGTCTTACGAGCATGGAT
ATCACGGGCATATCAGGACTTTTCT
UFO01278.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10834-RA | 443 | CG10834-RA | 61..351 | 55..345 | 1455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22106954..22107244 | 345..55 | 1455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:16:10 has no hits.
UFO01278.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:20 Download gff for
UFO01278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10834-RA | 36..335 | 55..354 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:31 Download gff for
UFO01278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10834-RA | 36..335 | 55..354 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:47 Download gff for
UFO01278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10834-RA | 61..360 | 55..354 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:04:47 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:46:20 has no hits.
