UFO01280.5prime Sequence
1205 bp (1055 high quality bases) assembled on 2008-07-17
> UFO01280.5prime
AACAGATCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTA
TCAGTCGACATGTCGAAGCCGACAACCCTAAAGGACGCATTGGCCAAGTG
GGAGGACCGCAATAAGCAGCCAGCCGCCACTGCCACGGAAATTGGACTTC
AGTTTCAGTATCCGCCGATCGAGAAAATGGATCCGATTCTCAATTCCCTT
ACCGAGTGCCAAAAGCTCAGCTTGTCCTCAAATATGATTGAGAAGATTAC
TGGAATTTCGGGAATGAAGAACCTGAAAGTCCTGAGCCTGGCACGTAACA
ATCTTAAAACGCTCAACGGCATAGAACCACTGGCCGATACTCTGGAGGAA
TTGTGGGTCAGCTACAACAACATCGAGAAGACCAAGCCCCTGGAATCGAT
GAAGGCCCTGCGTGTGTTTTACATATCCTTTAATATGATCAAGGACTGGA
CGGAGTTCATGCGCATGGGTGTTCCACCAAATCTCAGCGAGATCACATTT
GTGGGAAATCCTTTGAACGAGAACATGGACCAGTCTGCCTTCACTGCCGA
GGCAGTCCGTCGTCTGCCCAACATGAAGAAACTCGATGGGGAGCCTGTCA
TTCGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCA
GCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAAACGGGGCGAG
AGTGTCCATATGCCACGTTTAATCAAACTGTGAACTCACCCAGGATGCTG
AACGAAAAATATCTCATAACCCTTAGGAATAGCAGCTTCACCGTACACGC
CCAATCTGCGAATATATGGTTAAACCTGCGAATCGTCTTGCATCCTCGAG
CGTAACGTCCGTGGCCTATGAACGGTTACAAAGCTGAACCATATCCATTA
TCCCG
UFO01280.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10839-RC | 1023 | CG10839-RC | 86..632 | 59..605 | 2735 | 100 | Plus |
| CG10839-RB | 1300 | CG10839-RB | 86..632 | 59..605 | 2735 | 100 | Plus |
| CG10839-RA | 692 | CG10839-RA | 86..632 | 59..605 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15979571..15980117 | 59..605 | 2735 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:30:29 has no hits.
UFO01280.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:44 Download gff for
UFO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 78..632 | 51..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:24:26 Download gff for
UFO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 29..583 | 51..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:32 Download gff for
UFO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 78..632 | 51..605 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:32 Download gff for
UFO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15979563..15980117 | 51..605 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:44 Download gff for
UFO01280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15979563..15980117 | 51..605 | 99 | == | Plus |
