UFO01282.5prime Sequence
1217 bp (1036 high quality bases) assembled on 2008-07-17
> UFO01282.5prime
ATCTGCGGCCGCATAACATCGTATAGCATACATTATACGAAGTTATCAGT
CGACATGGCAGAAGCGGCAAATGTGCGCCAGAACCTTCAAAATGTGCCGT
CGATCTTCGAAATTTCAGCGTCAGAGACGCTGGACAACCTGATTTACCCG
GCACTGAGCAAGATATTCGACTACTTTGGACTACGCCTGGACTTTAAACT
ATGGGGGAGTTTGAGGATTCAGGAGGAGCTGTCGCCATTGCTGACTTGGC
TGCTGCAGTACCTGTATCTGCGCAAGAGGGCCTCCTCTTTCGGTGAGAGC
TTTTACGGATTGCAAAGGACGGTCACAACCACTGGGGATCTGCTGAACCG
CAGGCAGCAGTTCGCCTCTGCCACACTGCTAACCTTCATGCCTTACGTGG
AGCGGAAGCTAAGGACCAGGATCACCAGGCACGAGGACACCAGTCCCTGG
GAGCAACGCCTTCTAAGCGCATTCCATGCTTTCCATGCCGCCAAGGCGGC
GCACACATTCTTTTACCTCGTAAAGTACGCCTCAAACCACTCGCCCATCT
TCAGATTGTTGGGGCTGACCCTTCGCTATCCCAGCGAACCTCCCAAAGAG
GATCAGTGGACCTACGTGGTCCTAAAGATGCTGGAGGTCTTGGCCTTCTT
CCTGCAGTTCGTCCAGTGGTGGTACTCCAACGACCAGCGGCGGAAAGTGG
GTGGAACTCTGATAAATCCCGAAGCGATGCCGAGAAAGCAGCTGCCCAAG
GAAGTGCAGCAGAGCCTTCCCCAGCGGGGAGAGTGCCCAGTCTGCCTGCT
GTCCATCCAGACGCCCACTGCCTGCTCCGTTTCCGGCTACGTCTTTTGCT
GGAAGTGCATCGTTAGCCACATGAAAGGAGCACGGCACCTGCCCGGGTCA
CCCACTATCCCATCAGTCTGGACGACCTGTGCGCATCTACGAGACGGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGTCATATCA
TATCATATCATATCATATCACAACAAGCCTAGAGATCTGTCATGACTAGT
GCTGATCTCACATAAAAAAACGCCCGGCGCACGACGTTCTGAACAATCAG
AATGGAGTCTGAAGTCATTACTGGATCTATCACAGGAGTTCAGCGATCGA
ATCCAATTACGCCTGCCTTGTGCCACTCTACTTGCGAGAGACTGTGGTGT
AATTCCATTTAAGAGCA
UFO01282.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex12-RB | 2104 | CG3639-RB | 91..981 | 55..946 | 4390 | 99.7 | Plus |
| Pex12-RA | 1040 | CG3639-RA | 91..981 | 55..946 | 4390 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 816083..816973 | 55..946 | 4315 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:40 has no hits.
UFO01282.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:53 Download gff for
UFO01282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex12-RA | 87..988 | 47..955 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:27 Download gff for
UFO01282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3639-RA | 1..894 | 55..950 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:09 Download gff for
UFO01282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex12-RA | 87..988 | 47..955 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:09 Download gff for
UFO01282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 816079..816980 | 47..955 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:53 Download gff for
UFO01282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 816079..816980 | 47..955 | 98 | | Plus |
