UFO01313.5prime Sequence
1209 bp (1013 high quality bases) assembled on 2008-08-22
> UFO01313.5prime
GATCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAG
TCGACATGGCTTCCGATGGCGAGGACATCAGTGTTACACCCGCAGAATCC
GTAACATCGGCCACGGACACCGAGGAGGAGGATATAGACTCGCCACTAAT
GCAGTCCGAACTGCATTCCGACGAGGAGCAACCGGACGTGGAGGAGGTTC
CTCTGACGACGGAGGAATCGGAGATGGATGAGCTGATAAAGCAGCTGGAG
GACTACTCGCCCACCATACCAGACGCCCTCACCATGCACATCTTGAAAAC
GGCTGGCTTCTGCACAGTGGACCCCAAGATAGTGCGCCTCGTCTCGGTGT
CCGCGCAGAAGTTCATCTCGGATATTGCCAACGACGCACTGCAGCACTGC
AAGACGCGCACCACGAACATCCAGCATTCCAGCGGACACAGTTCCAGCAA
GGACAAGAAAAACCCCAAGGACAGGAAGTACACGCTGGCCATGGAGGACC
TGGTGCCGGCACTCGCGGACCACGGCATCACCATGCGCAAGCCGCAGTAT
TTCGTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGAC
ATGGAAGCCATCACAAACGGCATGATGAACCTGATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATATATTTGCCCATGTGAAACGGGGCGAGAGT
GTCATATGCCACGTTTAATCAAACTGTGAACTCACCAGGATGCTGAGACG
AAAAACATATCTCATAACCCTTTAGGAATAGCAGCTTCACGTACACGCCC
ATCCTGCAATATATGTGTAGACTGCGATCGTCTGTATTCCACTCCGAGCG
ATGAACGGTTCAGTTGGCTCATGAAACGGGTTAGCAACGGGGTACCATCC
ATTACAGTCACGCTCTATGCCATACGAAAATCCGGGATGAACATTCTCTA
TCACGCGGG
UFO01313.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf10-RA | 664 | CG2859-RA | 92..592 | 56..556 | 2505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2768285..2768540 | 301..556 | 1280 | 100 | Plus |
| 2L | 23513712 | 2L | 2767981..2768227 | 56..302 | 1235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:35:14 has no hits.
UFO01313.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:12 Download gff for
UFO01313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf10-RA | 92..599 | 56..565 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:10:40 Download gff for
UFO01313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf10-RA | 70..577 | 56..565 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:12 Download gff for
UFO01313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf10-RA | 92..599 | 56..565 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:12 Download gff for
UFO01313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2768286..2768540 | 302..556 | 100 | == | Plus |
| 2L | 2767981..2768226 | 56..301 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:12 Download gff for
UFO01313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2767981..2768226 | 56..301 | 100 | -> | Plus |
| arm_2L | 2768286..2768540 | 302..556 | 100 | == | Plus |
