UFO01314.5prime Sequence
564 bp (353 high quality bases) assembled on 2008-08-22
> UFO01314.5prime
AACAGATCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTA
TCAGTCGACATGAACGCGGAAAAGCTGAAGAAGTTGCAGGCGCAGGTGCG
CATTGGCGGCAAGGGCACCCCTCGCCGCAAGAAGAAGATCGTCCACTCCA
CGCCCGCCACCGACGACAAGAAGCTGCAGTCGTCGCTCAAGAAGCTGTCG
GTAAACACAATTCCCGGCATCGAGGAGGTGAACATCATCAAGAACGATGG
CACCGTCATCCACTTCAACAATCCGAAGGCCCAGGCCTCGCTGCCGACGA
ACACGTTTGCCATCACGGGGTCATGGCGAGAAACAAGACGATCACCGAGG
ATGGGGGCCCGGCATTCTGGACCGCAACTGGGTCCCCAGGAACATCCAAC
CAGCTGAAGAAGCTTGGCCACGGAGATTGGCCCAGAAAGAGCGGGGGCCG
GGCGGAACAGCGGCTTCTTCCGCGCCAATGCCGGGGACAAAGATGGCCCA
ATCGGGCCAAAATTCAGGAGGGGGGGCCTCGCGAACAAAAGAGAAAAACC
CGGGGGGGGGGGCT
UFO01314.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bic-RB | 992 | CG3644-RB | 155..587 | 60..503 | 1670 | 94 | Plus |
| bic-RA | 1474 | CG3644-RA | 83..515 | 60..503 | 1670 | 94 | Plus |
| CG11835-RD | 3183 | CG11835-RD | 568..840 | 58..331 | 565 | 81.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12870403..12870763 | 60..429 | 1410 | 96.5 | Plus |
| 2L | 23513712 | 2L | 562922..563183 | 319..58 | 545 | 80.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:15:28 has no hits.
UFO01314.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:38 Download gff for
UFO01314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bic-RA | 73..480 | 49..470 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:10:41 Download gff for
UFO01314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bic-RB | 149..546 | 60..470 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:34 Download gff for
UFO01314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bic-RA | 73..480 | 49..470 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:34 Download gff for
UFO01314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12870403..12870820 | 60..488 | 94 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:38 Download gff for
UFO01314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8757908..8758325 | 60..488 | 94 | <- | Plus |
