UFO01317.5prime Sequence
1204 bp (1028 high quality bases) assembled on 2008-08-22
> UFO01317.5prime
TGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGA
CATGGTTCTGGAAATGGAGATGTCCAAGACCTATCAGTACCGCAAGGTGA
TGAAGCCCATGCTGGAGCGTAAGCGCCGTGCCAGGATTAACAAGTGCCTG
GACGAGCTCAAGGACATCATGGTGGAGTGCCTGACCCAGGAGGGCGAGCA
CATCACCCGGCTGGAGAAGGCCGACATCCTGGAGCTGACCGTGGAGCACA
TGAAGAAGCTGCGTGCCCAGAAGCAGCTGCGTCTGTCCAGCGTCACCGGT
GGAGTGTCTCCGAGTGCCGATCCCAAGCTTAGCATCGCTGAGAGTTTCCG
TGCTGGCTACGTTCATGCTGCCAATGAAGTGTCCAAAACCTTGGCCGCTG
TACCCGGAGTGAGTGTGGATCTCGGCACCCAGCTGATGAGTCACCTTGGC
CATCGTCTCAACTACCTGCAAGTGGTGGTTCCCTCGCTGCCCATTGGAGT
GCCTCTTCAAGCTCCAGTAGAGGATCAAGCTATGGTCACTCCACCTCCCT
CGGAATGCGACAGCTTGGAGAGCGGAGCCTGCAGCCCGGCGCCCAGCGAG
GCCAGCTCCACCTCTGGCCCCATGTGGCGTCCCTGGGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATA
ATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTG
CTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAA
CAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC
CAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTA
CTGTTGTAATTCATTAAGCATTCTGCCGACATGGAGCCATCACAAACGGC
ATGATGACCTGATCGCAGCGCATCAGCACCTTGTCGCCTGCGTATATATT
TGCCCATGTGAAACGGGGGCGAGAGTGTCATATGCCACGTTAATCAACTG
GTGAACTCACCAGATGCCTGAACGAAAACATATTTCTCAATAATCGTAGA
ATGCAAGTTCACGTAACCGCCACTGCCATATTGTAACTGCCCGAAATCCT
GGATACTCAGCGGTTACGTCATGGCCATGGACGCGTACAGGGTACATTCC
TATT
UFO01317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)mbeta-HLH-RA | 978 | CG14548-RA | 131..715 | 52..636 | 2925 | 100 | Plus |
E(spl)m3-HLH-RA | 1305 | CG8346-RA | 204..397 | 64..257 | 640 | 88.7 | Plus |
E(spl)mgamma-HLH-RA | 911 | CG8333-RA | 114..289 | 67..242 | 460 | 84.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26005309..26005893 | 636..52 | 2925 | 100 | Minus |
3R | 32079331 | 3R | 26022026..26022219 | 64..257 | 640 | 88.7 | Plus |
3R | 32079331 | 3R | 25999964..26000139 | 67..242 | 460 | 84.1 | Plus |
3R | 32079331 | 3R | 26037178..26037291 | 67..180 | 405 | 90.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:57 has no hits.
UFO01317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:40 Download gff for
UFO01317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)mbeta-HLH-RA | 124..724 | 44..643 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:10:45 Download gff for
UFO01317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HLHmbeta-RA | 124..724 | 44..643 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:06 Download gff for
UFO01317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)mbeta-HLH-RA | 124..724 | 44..643 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:06 Download gff for
UFO01317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26005300..26005900 | 44..643 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:40 Download gff for
UFO01317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21831022..21831622 | 44..643 | 98 | | Minus |