UFO01320.5prime Sequence
1196 bp (1028 high quality bases) assembled on 2008-08-22
> UFO01320.5prime
TGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGA
CATGAAGTCCCTGACGGCCGTCTGCCAGACAGGTGCCTCCGGAATGCCGG
CCTTGAATGCCAGCGGGCGCATCCAGCGCCATCCCACGCACCGCGGCGAC
GGGGAGAACGCCGAGATGAAGATGTATCTGTCCAAACTGAAGGACCTCGT
TCCGTTCATGCCCAAGAACAGGAAGCTCACCAAGCTGGAGATCATCCAGC
ACGTCATCGACTACATCTGCGACCTGCAGACCGAGCTGGAGACGCACCCC
GAGATGGGCAACTTCGATGCGGCAGCCGCTCTGACGGCGGTGAACGGACT
CCACGAGGACGAGGACAGCGACATGGAGGATGCGGATGCCGAGGCAGAAG
CGGAAGTCGATCCAGATATCCTCGCCCAGCGCCTGAATGCCGAGCAGCCG
GCGAAAGTCTCTAGTCCCGCCGCCCGTCTCCCGCTTACCGATCGCCAAAC
GCCCAACACTCTTGTGGCGCCCGCCCATCCGCAGCAGCATCAGCAGCAGC
AGCAACTGCAACTGCAGCAGCAACAACTGCAATCACAGCAGCAACTGTCC
AACAGTTTAGCAACGCCACAGAATGCGGAGAAAGACAGCAGACAGTCGGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACC
GAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTA
TCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCA
CTCATCGCAGTACTGTTGTAATTCATTAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGATCTGATCGCAGCGGCATCAGCACTTGTCGCT
GCGTATATATTTGCCCATGTGAAACGGGGAGAGAGTGTCATATGCCACGT
TTAATCAAACTGTGACTCACCAGATGCTGAAACGAAACTATCCATTACGT
AAGAATAGGCAGGTCCGTAACCGCCCATCTGCAAATGGTCAACTGCGAAT
TCCTGGATACCTCGCGGTTAACCGTCAGTGTCTCATGGGAGAGACG
UFO01320.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| emc-RA | 2049 | CG1007-RA | 265..861 | 52..648 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 749664..750227 | 52..615 | 2820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:35:20 has no hits.
UFO01320.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:15 Download gff for
UFO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| emc-RA | 261..866 | 44..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:10:49 Download gff for
UFO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| emc-RA | 255..860 | 44..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:16 Download gff for
UFO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| emc-RA | 261..866 | 44..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:16 Download gff for
UFO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 749660..750227 | 44..615 | 99 | -> | Plus |
| 3L | 752272..752309 | 616..654 | 94 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:15 Download gff for
UFO01320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 749660..750227 | 44..615 | 99 | -> | Plus |
| arm_3L | 752272..752309 | 616..654 | 94 | == | Plus |
