UFO01327.5prime Sequence
1270 bp (1078 high quality bases) assembled on 2008-08-22
> UFO01327.5prime
CTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCG
ACATGGTAGCACCAGCAAACACAATCCAAACTAATGCGAATTCCGACGAC
GATGAGGGAGTGCGGTCGGCGCCTACCTCCATGCTGGTGCTGGACGCCAA
GCGGAAGAGCGCCTTCTTGCCGTACCGCCCCCAGTCCACCGTGCTGACCA
ACTTGCAGCGCGGCAATACGGAGGCCACCTTTTGCCCCGTCGAAGTTTCG
CTCTCCTTTCACGAACGCGCTGGCCAAGGCGAGATCACGGAGGAGCAGGT
GGCAGCGGAAAGAGCGCGTCAGCAGAACATTGATTACAAGGATGCACATG
GTTTCACAGCCTTACATTGGGCAGCCTCCTACGGTCAACTGGTTTCCGTG
CAGCTCCTCGTCGCGGCTGGTGCCAATGTGAACACTATGGCTCCAGATTT
GATTAGTCCTCTACTCCTAGCTGCCGCCGGTGGGCATAACGAGATCGTCC
GCTTCTTGCTGGAACACGGCGCTGATTCGGGCCACATGGACATCGTTGGA
AACACGGCGCTTATGTACGCAGCGGCCGGCAATCATCCGCATACTTGCAA
CGAGCTCCTGGCCAAAGACCTGGATCTAAGTGCCACCAACGAGGACGGAG
ACACGGCCTACTCGCTGGCCGTAGAGCATGGGGCTCATCTGGCGCAGGCG
CTACTGGAGCAGTACATGACGGCCATAATCACAGCGGGAGCCTTCGGTAG
TATTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCACTCATCGCAGTACTGTGTAATTCATTAAGCATTCTGCCGACATGC
AGCATCACAAACGGCATGATGAACCTGAATCGCCAGCGCATCAGCCACTT
GTCGCCTTGCGTATAATATTGCCCATGGTGAACGGGGGCGAAAAGTGTCC
ATATGGCCGTTAATCAACTGGGCAACTACACAGGATGGCGTGAACAAAAC
AATTCTATACGTAAGAAATGCAGTTCCGTACCGCCCATCTGGGAAATATG
TGTGAGAAAACAGCGCCGAA
UFO01327.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5846-RB | 952 | CG5846-RB | 171..872 | 53..754 | 3495 | 99.9 | Plus |
| CG5846-RA | 845 | CG5846-RA | 27..728 | 53..754 | 3495 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9956292..9956993 | 754..53 | 3495 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:49 has no hits.
UFO01327.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:42 Download gff for
UFO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5846-RA | 27..733 | 53..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:10:57 Download gff for
UFO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5846-RA | 815..1521 | 53..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:17 Download gff for
UFO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5846-RA | 27..733 | 53..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:17 Download gff for
UFO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9956287..9956995 | 52..762 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:42 Download gff for
UFO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9956287..9956995 | 52..762 | 99 | -> | Minus |
