UFO01329.5prime Sequence
1243 bp (1041 high quality bases) assembled on 2008-08-22
> UFO01329.5prime
CTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCG
ACATGTCCATCCTGAAGGAGCTGAATGTCCAGGAGTACGAGCCGCGCGTG
GTCAACCAACTGCTGGAGTTCACCTTCCGCTATGTAACCTGCATTCTGGA
CGACGCCAAGGTGTACGCCAACCATGCGCGCAAGAAGACCATCGACTTGG
ACGACGTGCGTCTGGCCACCGAGGTTACGCTGGACAAGAGCTTCACCGGG
CCGTTGGAGCGCCACGTTCTAGCCAAGGTGGCCGACGTGCGCAACAGCAT
GCCCCTGCCACCCATTAAGCCGCACTGCGGTCTCCGACTGCCGCCCGACC
GCTACTGTCTCACCGGCGTCAACTACAAACTGCGGGCCACTAATCAGCCC
AAGAAAATGACCAAGTCGGCGGTGGAGGGCCGTCCACTGAAGACCGTCGT
TAAGCCCGTCTCCAGCGCCAATGGTCCGAAGAGGCCACACTCCGTGGTGG
CCAAGCAGCAGGTGGTGACCATTCCCAAGCCCGTCATCAAGTTTACCACC
ACTACGACAACGAAAACGGTGGGCAGCTCCGGCGGATCTGGGGGCGGCGG
TGGTCAGGAGGTTAAGAGCGAGAGCACCGGCGCCGGCGGAGATCTCAAGA
TGGAGGTGGACAGCGATGCGGCGGCCGTGGGCAGCATCGCTGGCGCATCC
GGTTCGGGAGCAGGAAGTGCCAGCGGAGGAGGAGGAGGAGGAGGATCATC
TGGCGTTGGAGTGGCCGTCAAGCGGGAACGTGAGGAGGAGGAGTTTGAGT
TTGTGACCAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACAATAAAAACGCCC
GGCGGCACCGAGCGTTCTGACAAATCCAGATGGAGTCTGAGTCATTACTG
ATCTATCAACAGAGTCCAGCGAGCTCGATATCAATACGCCCCGCCTGCCA
CTCATCGCAGTACTGTTGTATTCATTAAGCATTCTGCGAAATGGAGCCAT
CCAAACCGCATGATGACTGATCGCCAGCGGCCATCAGCACCTTGTTCGCT
TGGCGTATATATTTTGCCATGGTGAACCGGGGCGAGAAGTGTCATTGGCC
AGTTAATCAACCTGTGGTAACTCACCCAGGATGTGTCTGCTGT
UFO01329.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)1-RA | 1124 | CG6474-RA | 173..932 | 52..811 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17842474..17843156 | 129..811 | 3415 | 100 | Plus |
X | 23542271 | X | 17842333..17842410 | 52..129 | 390 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:41:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc4-element | 2791 | Doc4-element DOC4 2791bp | 1457..1487 | 761..731 | 110 | 83.9 | Minus |
UFO01329.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:28 Download gff for
UFO01329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 168..936 | 47..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:10:58 Download gff for
UFO01329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 154..922 | 47..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:44 Download gff for
UFO01329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 168..936 | 47..817 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:44 Download gff for
UFO01329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17842333..17842409 | 52..128 | 100 | -> | Plus |
X | 17842474..17843164 | 129..823 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:28 Download gff for
UFO01329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17736366..17736442 | 52..128 | 100 | -> | Plus |
arm_X | 17736507..17737197 | 129..823 | 98 | <- | Plus |