Clone UFO01329 Report

Search the DGRC for UFO01329

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:13
Well:29
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO01329.5prime Sequence

1243 bp (1041 high quality bases) assembled on 2008-08-22

> UFO01329.5prime
CTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCG
ACATGTCCATCCTGAAGGAGCTGAATGTCCAGGAGTACGAGCCGCGCGTG
GTCAACCAACTGCTGGAGTTCACCTTCCGCTATGTAACCTGCATTCTGGA
CGACGCCAAGGTGTACGCCAACCATGCGCGCAAGAAGACCATCGACTTGG
ACGACGTGCGTCTGGCCACCGAGGTTACGCTGGACAAGAGCTTCACCGGG
CCGTTGGAGCGCCACGTTCTAGCCAAGGTGGCCGACGTGCGCAACAGCAT
GCCCCTGCCACCCATTAAGCCGCACTGCGGTCTCCGACTGCCGCCCGACC
GCTACTGTCTCACCGGCGTCAACTACAAACTGCGGGCCACTAATCAGCCC
AAGAAAATGACCAAGTCGGCGGTGGAGGGCCGTCCACTGAAGACCGTCGT
TAAGCCCGTCTCCAGCGCCAATGGTCCGAAGAGGCCACACTCCGTGGTGG
CCAAGCAGCAGGTGGTGACCATTCCCAAGCCCGTCATCAAGTTTACCACC
ACTACGACAACGAAAACGGTGGGCAGCTCCGGCGGATCTGGGGGCGGCGG
TGGTCAGGAGGTTAAGAGCGAGAGCACCGGCGCCGGCGGAGATCTCAAGA
TGGAGGTGGACAGCGATGCGGCGGCCGTGGGCAGCATCGCTGGCGCATCC
GGTTCGGGAGCAGGAAGTGCCAGCGGAGGAGGAGGAGGAGGAGGATCATC
TGGCGTTGGAGTGGCCGTCAAGCGGGAACGTGAGGAGGAGGAGTTTGAGT
TTGTGACCAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACAATAAAAACGCCC
GGCGGCACCGAGCGTTCTGACAAATCCAGATGGAGTCTGAGTCATTACTG
ATCTATCAACAGAGTCCAGCGAGCTCGATATCAATACGCCCCGCCTGCCA
CTCATCGCAGTACTGTTGTATTCATTAAGCATTCTGCGAAATGGAGCCAT
CCAAACCGCATGATGACTGATCGCCAGCGGCCATCAGCACCTTGTTCGCT
TGGCGTATATATTTTGCCATGGTGAACCGGGGCGAGAAGTGTCATTGGCC
AGTTAATCAACCTGTGGTAACTCACCCAGGATGTGTCTGCTGT

UFO01329.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
e(y)1-RA 1124 CG6474-RA 173..932 52..811 3800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17842474..17843156 129..811 3415 100 Plus
X 23542271 X 17842333..17842410 52..129 390 100 Plus
Blast to na_te.dros performed 2014-11-28 22:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Doc4-element 2791 Doc4-element DOC4 2791bp 1457..1487 761..731 110 83.9 Minus

UFO01329.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:28 Download gff for UFO01329.5prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 168..936 47..817 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:10:58 Download gff for UFO01329.5prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 154..922 47..817 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:44 Download gff for UFO01329.5prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 168..936 47..817 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:44 Download gff for UFO01329.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17842333..17842409 52..128 100 -> Plus
X 17842474..17843164 129..823 98 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:28 Download gff for UFO01329.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17736366..17736442 52..128 100 -> Plus
arm_X 17736507..17737197 129..823 98 <- Plus