UFO01332.5prime Sequence
1216 bp (1044 high quality bases) assembled on 2008-08-22
> UFO01332.5prime
TCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTC
GACATGCTGGACATCAAGTCCTCCGCCGATTACTTGTCACGCTCCACGGG
CAGCTTCAGCAACTTCTCGATGCTCTTCGCAGATTCCTCGTACAAATCGT
CGTGGGGCTCCCACAGTTCGACACAATCGCAAGGTTACAGCTCGAACGCC
CTGGGCATCAAACATGATCCGCACTCACAACTACGGCAACCTGATCCATA
TCAAATGTTCGGACCCACCAGCAGCAGACTGGCCAGCTCAGGCTCTGGCC
AAATCCAGCTGTGGCAGTTCCTTCTCGAGCTGCTCTCGGACTCCAATAAC
GCCAGCTGCATCACCTGGGAGGGCACCAACGGCGAGTTTAAGCTAACCGA
TCCCGACGAGGTCGCCCGCCGCTGGGGCGAGAGGAAGTCCAAGCCCAACA
TGAACTACGATAAGCTCAGTCGCGCCTTGAGGTACTACTACGACAAAAAT
ATAATGACCAAGGTGCACGGCAAGCGGTATGCGTACAAATTCGATTTCCA
AGGCCTGGCAGCTGCTACTCAGCCGGCGGCCAGCGATCCCACCTACAAAT
ACCAGAGCGACTTGTTCATGACACCATATCACCACAGCGCCAAGCTCAGC
TCGTTCATGAGTCCGCATCATGGCATGACCTCATCCTCGGCCTCGATCTT
CCCGTCGGCCGCCTCGTGGGGCAACTGGGGCAGTCCGGCCACGAATCTCT
ACCAGCCGCACTCGATGAGCCACGTGACCCCCTCCCACGTAGCGCCCCAC
CTGAGCAGCTATCCCCACTACGCAGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCAC
AATAAAAAACGCCGGCGGCACGAGCGTTCTGAACAATCCAGATGGAGTCT
GAGTCATACTGGATCTATCAACAGGAGTCAGCGAGCTCGATATCAATACG
CCCCGCCTGCCACTCATCGCAGTACTGTTATCATAGCATTCTGGCGACTG
GAGCATCCAACGGCATGATGACTGGATCGCCACGGCATCAGCCCTGGTGC
TGGCTAATATTGGCCATGTACGGGCGAAATGTCATTGCCGTTTAACCAAC
CTGGTAAACTACCAGA
UFO01332.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets65A-RB | 2177 | CG7018-RB | 654..1424 | 54..824 | 3855 | 100 | Plus |
| Ets65A-RE | 4190 | CG7018-RE | 1695..2386 | 133..824 | 3460 | 100 | Plus |
| Ets65A-RD | 4190 | CG7018-RD | 1695..2386 | 133..824 | 3460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6121492..6121702 | 480..690 | 1055 | 100 | Plus |
| 3L | 28110227 | 3L | 6118956..6119150 | 289..483 | 975 | 100 | Plus |
| 3L | 28110227 | 3L | 6121975..6122109 | 690..824 | 675 | 100 | Plus |
| 3L | 28110227 | 3L | 6112120..6112198 | 54..132 | 395 | 100 | Plus |
| 3L | 28110227 | 3L | 6114292..6114353 | 182..243 | 310 | 100 | Plus |
| 3L | 28110227 | 3L | 6112368..6112423 | 130..185 | 280 | 100 | Plus |
| 2L | 23513712 | 2L | 547993..548162 | 466..297 | 280 | 77.6 | Minus |
| 3L | 28110227 | 3L | 6115954..6116003 | 243..292 | 250 | 100 | Plus |
| 2L | 23513712 | 2L | 547825..547902 | 557..480 | 240 | 87.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:45:23 has no hits.
UFO01332.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:24 Download gff for
UFO01332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 654..1424 | 54..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:11:01 Download gff for
UFO01332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 906..1676 | 54..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:29 Download gff for
UFO01332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 654..1424 | 54..824 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:29 Download gff for
UFO01332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6121976..6122109 | 691..824 | 100 | == | Plus |
| 3L | 6112120..6112198 | 54..132 | 100 | -> | Plus |
| 3L | 6112371..6112421 | 133..183 | 100 | -> | Plus |
| 3L | 6114294..6114353 | 184..243 | 100 | -> | Plus |
| 3L | 6115955..6116002 | 244..291 | 100 | -> | Plus |
| 3L | 6118959..6119148 | 292..481 | 100 | -> | Plus |
| 3L | 6121494..6121702 | 482..690 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:24 Download gff for
UFO01332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6115076..6115209 | 691..824 | 100 | == | Plus |
| arm_3L | 6105220..6105298 | 54..132 | 100 | -> | Plus |
| arm_3L | 6105471..6105521 | 133..183 | 100 | -> | Plus |
| arm_3L | 6107394..6107453 | 184..243 | 100 | -> | Plus |
| arm_3L | 6109055..6109102 | 244..291 | 100 | -> | Plus |
| arm_3L | 6112059..6112248 | 292..481 | 100 | -> | Plus |
| arm_3L | 6114594..6114802 | 482..690 | 100 | -> | Plus |
