UFO01361.5prime Sequence
1176 bp (973 high quality bases) assembled on 2008-08-22
> UFO01361.5prime
TGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGA
CATGGACATTTCGCAAATGTGCCGCGTTTGCAGGGACGAATCCGACTGCC
TGTTGGATATATATACAGAGCCATATGCCTCCTCCAATCGGGTCCAGGAG
CAGGAGCCGGTCTTGGCCACAATGCTGAGGGAATGCAGCGGATGCAGCGT
GCATAAGGAGGACGGAATGCCGCAGTTCATCTGCGTGGAGTGTGCGGAGG
CCGTAAGAAATGCCTATCGGCTAAGACGGCAATGCCGAAAGAGCCATCAG
TACTTTGAACAGCTGCGTCTGATGATGAAGGAGCTGGACGATATAGAGTA
TTGCCTGAATATAGGGGATAACATAGAACCACAGATGCCGGTCTCGGTAA
TGGAAGCTGGTAAAACGCCGGAGACATCCGAACCTCTTTTAGTTGAGCTT
GTGCAGGTTAAGTACATGCCTCCAGAGCCGAAGCCAATATCTTCTCCTCT
TCCAGACAACAATGAGCATAAGCTCGCGCAAAGTTATTCTCCAGCAAAGA
CGCCACACAATAAGTCCAAGAGGAGGGCGAGATCCTACTCGGACAATGAC
TCATGGAGCCCGGATAGTGAGCTTGAACACGAAGATGATGATAAAATCTG
GAACGCCTCAAAACGGGGCAAACCGAAAAGGGTTCCCGGACCATATCGGT
GCAAGCTCTGCACACAGTCGTTCACCCAAAAACAAAACCTAGAGATTCAC
ATGCGCATACATACTGGCGAGCGACCCTACAAGTGCTCCCTATGTCCGCG
ATCCTTTGCCCAGAAGGGCAACCTGCAGAGCACACACGTTGTCACACCGG
CGAGCGTCCCTTCGGTGTCCGAACTGCCCAAGCGCTTCCGGCAAGTTGGG
CAACTGCAGTCCACACCCGGGACTCATACTGGCGACAGCCGTCAAATGTC
AAATGTCAGCAAGCTCAGCACTAACGCTACAAACCATGTCAGCACACACG
CGAGGAGCGACGACGGACAGCAGAACCAAAAGAATTAGTCAGGCAGCCTT
CTAGACATTCGATGGCCGCGGGCAGTAATGCTAATCTAATCTATCTAATC
CTAATCACTAGCTAGGAATCTGCTGACATGCTGATCCAATACGGCCGGAC
GAGGCTCTGACATCATGGGATCTGAG
UFO01361.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17359-RA | 1352 | CG17359-RA | 70..1049 | 52..1012 | 4420 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13998296..13999182 | 935..52 | 4190 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:14:00 has no hits.
UFO01361.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:49 Download gff for
UFO01361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17359-RA | 61..1058 | 43..1023 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:11:25 Download gff for
UFO01361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17359-RA | 56..1053 | 43..1023 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:22 Download gff for
UFO01361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17359-RA | 61..1058 | 43..1023 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:22 Download gff for
UFO01361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13998194..13999192 | 43..1023 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:49 Download gff for
UFO01361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13991294..13992292 | 43..1023 | 97 | <- | Minus |
