UFO01362.5prime Sequence
1199 bp (1012 high quality bases) assembled on 2008-08-22
> UFO01362.5prime
CTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCG
ACATGGCGGAAATATGCCGAGTTTGTATGGATATTTCTGGTAAACTCGTT
AACATATTTGACGCCAGACGAAGAACCAGAGTTTCCATTGCCGAGATGAT
CGCGCAGTGCACCGGATTCGAGGTCAAACGTGGCGATTTGTTTTCGGAAA
TGATATGCCCACAGTGCTATGAGGACGTAAAGAGCGCGTATGGGATAAGG
CAAACTTGTGAGGAAAGCCACCAGTTCTACTGCCGAGTTCGCGATGAAGG
CATCGAGGATGCTTTATGCGCCTTGCTCGAAGAAGAAGACTGGGAGATTT
CGGAAGACGAAGATGCGCGGATTGATTCTGCATCCGCTGCTGATGACGAT
GGGAAAAGCGACAGCAAGAAGGTAGCATTCGAATGTCGAGAATGCCACAA
GAAATACCAGCGAAAGGGAACTTTTCTGAGGCACATGCGAACACACATGG
ACGGACAATCCTTCCCATGCCCCTACTGCAAGCGGAACTTTAGACTTAGA
GTCACTCTCAAGGCGCACATGAAGACCCACAATGCAGCGAAACCCTACGA
GTGTTCCCACTGCGCCAAGACCTTTGCGCAGCAGTCCACTCTGCAGTCGC
ATGAGCGAACTCACACTGGCGAACGACCATTCAAGTGTTCACAGTGCTCA
AAAACCTTTATTAAATCATCCGATCTCCGGCGTCACATCCGCACACATGG
CAGCGAGAGACCGTTCAAGTGCTCCAAGTGCACGAAAACATTTACGAGGA
AGTTTCACCTTGATAACCATTTCCGTTCTCACACTGGTGAACGACCATTC
AAGTGTTCCCACTGCCCCAAGGCCTTCGCTATGAAGCAGCACTCAAGCAG
CACAGCCGCTGCACTTACCAGATCGTCATTTCGCTGCTCCACTGTCCCAG
ACTTTCGCTGACAGCACTCTCAGGAGCACAGCTCGTACACACGCTGAGAC
ATTTAGTGTCCTCACTGTGCAGTTCTATAGCAGAGAAAACACTGCTAGAC
TATCTCGAGATACCCAGCAGCCTTCTAGACATCGTTTGGGCGGGGTAGTA
TTGTTAATCTAATCAATCTATCTATCCACTAGCTAGGAATCCGCTGATGC
TGATTCGCATAAGCCGGCGACGAGCTTCTGACATCCAATATGATTCCTT
UFO01362.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15436-RA | 1411 | CG15436-RA | 182..1214 | 53..1063 | 4625 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4463846..4464736 | 53..940 | 4305 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:45:33 has no hits.
UFO01362.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:30 Download gff for
UFO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15436-RA | 172..1219 | 43..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:11:26 Download gff for
UFO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15436-RA | 141..1188 | 43..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:32 Download gff for
UFO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15436-RA | 172..1219 | 43..1070 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:32 Download gff for
UFO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4463838..4464883 | 45..1070 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:30 Download gff for
UFO01362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4463838..4464883 | 45..1070 | 97 | == | Plus |
