UFO01369.5prime Sequence
1247 bp (1076 high quality bases) assembled on 2008-08-22
> UFO01369.5prime
TCTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTC
GACATGTACAAGCGCAAAACCGCGAGTATTGTTAAAAGAGACAGCTCCGC
AGCGGGCACCACCTCCTCGGCTATGATGATGAAGGTGGATTCGGCTGAGA
CTTCGGTCCGGTCGCAGAGCTACGAGTCTACACCCGTTAGCATGGACACA
TCACCGGATCCTCCAACGCCAATCAAGTCTCCGTCGAATTCACAATCGCA
ATCGCAGCCTGGACAACAGCGCTCCGTGGGCTCACTGGTCCTGCTCACAC
AGAAGTTTGTGGATCTCGTGAAGGCCAACGAAGGATCCATCGACCTGAAA
GCGGCAACCAAAATCTTGGACGTACAGAAGCGCCGAATATACGATATTAC
CAATGTTTTAGAGGGCATTGGACTAATTGATAAGGGCAGACACTGCTCCC
TAGTGCGCTGGCGCGGAGGGGGCTTTAACAATGCCAAGGACCAAGAGAAC
TACGACCTGGCACGTAGCCGGACTAATCATTTGAAAATGTTGGAGGATGA
CCTAGACAGGCAACTGGAGTATGCACAGCGCAATCTGCGCTACGTTATGC
AGGATCCCTCGAATAGGTCGTATGCATATGTGACACGTGATGATCTGCTG
GACATCTTTGGAGATGATTCCGTATTCACAATACCTAATTATGACGAGGA
AGTAGATATCAAGCGTAATCATTACGAGCTGGCCGTGTCGCTGGACAATG
GCAGCGCAATTGACATTCGCCTGGTGACGAACCAAGGAAAGAGTACTACA
AATCCGCACGATGTGGATGGGTTCTTTGACTATCACCGTCTGGACACGCC
CTCACCCTCGACGTCGTCGCACTCCAGCGAGGATGGTAACGCTCCAGCAT
GCGCGGGGAACGTGATCACCGACGAGCACGGTTACTCGTGCAATCCCGGG
ATGAAAGATGAGATGAAACTTTTGGAGAACGAGCTGACGGCCAGATATCT
TCCAAAATTATCTGTCCGGTCATTCGCTGCGGCGATTTTATCCGATGATC
CGAATCTAGAAAACCCGCCGCCTGCTGCCGCTGATCCTCCGCAGGAAGAC
CTCCACTTGGCGTTAAAGCGACAAGAATTGGCGCCTGTTTGATGTTCAGG
CTCCGAGCTTCTAGACATTCGTTTGGGCGCGGGCAGGTCTGACTAACTAA
CTAAGCTAATCTATCCACCTAGCCTTGAGAATCGGGGCGTGAGACAT
UFO01369.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E2f2-RB | 2002 | CG1071-RB | 706..1816 | 53..1154 | 5190 | 98.4 | Plus |
| E2f2-RA | 1485 | CG1071-RA | 189..1299 | 53..1154 | 5190 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21154646..21154985 | 1059..723 | 1550 | 99.1 | Minus |
| 2L | 23513712 | 2L | 21155743..21156044 | 354..53 | 1510 | 100 | Minus |
| 2L | 23513712 | 2L | 21155107..21155366 | 722..463 | 1300 | 100 | Minus |
| 2L | 23513712 | 2L | 21155572..21155682 | 463..353 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:15:06 has no hits.
UFO01369.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:45 Download gff for
UFO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E2f2-RA | 189..1304 | 53..1159 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:11:35 Download gff for
UFO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E2f2-RA | 202..1317 | 53..1159 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:09 Download gff for
UFO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E2f2-RA | 189..1304 | 53..1159 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:09 Download gff for
UFO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21155107..21155365 | 464..722 | 100 | <- | Minus |
| 2L | 21155572..21155681 | 354..463 | 100 | <- | Minus |
| 2L | 21154646..21154985 | 723..1059 | 99 | <- | Minus |
| 2L | 21155744..21156044 | 53..353 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:45 Download gff for
UFO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21154646..21154985 | 723..1059 | 99 | <- | Minus |
| arm_2L | 21155107..21155365 | 464..722 | 100 | <- | Minus |
| arm_2L | 21155572..21155681 | 354..463 | 100 | <- | Minus |
| arm_2L | 21155744..21156044 | 53..353 | 100 | | Minus |
