UFO01383.5prime Sequence
1133 bp (682 high quality bases) assembled on 2008-08-22
> UFO01383.5prime
CTGCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTCG
ACATGGAAAACCATTTCAGCGCCACCAGTCGCCCCTCAGCCACGCCCAGA
ATGTGCACCACCGCCTCTGCCGTCGGTGCTGCCGCCAGCGCCGCCGCCGC
CGCCGGCAACAACAATAACAACAGCAATAGCAGCAGCAACAACAACGCAA
CAACCGGCAACAATTTAAGTGTTAGCACTGCAGCCGGAGGAGCCACAAAT
GCCGCAGCAACGGCACAACCCATCCAAGTGATACCAATGCCCATGCTGCC
CACCGGAGCGGCGCAAATCATAATTGGCCAGCAGCCACAGGGTCAGGCGA
CGGCGACGGGTCTGCAGCCACAATTGATACCGCTGCAGGCCAACCAGATT
ATGCTGCAGGCTGCGCAGCAGCAGCCACAGATGCAGGTGATGCAGCTGCC
CGATGGCCAGACTATATTCTATCAGACGCCCACCATTGCCGCCTTGGATC
CGAATGCAGCGGCCAACGCCGCAGCTGCCATGGCAGCCCAGCCGACGCCG
CACTACCTCAATTATCAATGGGCAGCTGGGTGCAGATCAATCCAGCACCG
AAGCGCTAATCAGGGCGGCAACCCCCCAGCTGGGCAAACAGAATAATAAT
GGGTGCCGCAAACAGCGATGGCAGCGGGTGAATTGCAAGCGCGCCCGCCA
ATGCCGGGAGTAAGGGCCCGGGAGTGGGCACAAGTGGGTTACCCAAAAAA
CAACAAGCAGCAGCATCAACAAGTACCAATCCCAGGACCCAAAACCAGGC
AGCAGCAAGCAACAAGCAGCAGACGGTGGGGGGCGGTGGCTGCCAGTGCT
GCAGTCAATAATTATAAGCGGCGATTGTCAGCACAAGTACCACTGGAACG
AATACGACAGCGAGACGAGAGCTCAGGCCGAGCGACGAGAAGCGCTCTAT
GTGATGCAGCAGTACAACGTATCTCATCGGCGCAGCAGGCAGCTAGAGTC
GGCATACCAGACGGTGCAGTATCTGCCGATCTGTCATCGCACGCATGATC
GGCTCTGGCAGGTGGTGCTCATCGTCAAGGAAAGGCACAAATGCCGACTG
AAGCAACATGCATGCACAGTGGGGGATTACCCT
UFO01383.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nf-YA-RA | 2055 | CG3891-RA | 219..1205 | 53..1040 | 3575 | 93.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9441067..9441892 | 907..53 | 2820 | 95.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:53:36 has no hits.
UFO01383.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:13 Download gff for
UFO01383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 211..1126 | 43..977 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:11:36 Download gff for
UFO01383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3891-RA | 197..1112 | 43..977 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:26 Download gff for
UFO01383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 211..1126 | 43..977 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:26 Download gff for
UFO01383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9440985..9441900 | 43..977 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:13 Download gff for
UFO01383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9434085..9435000 | 43..977 | 94 | | Minus |
