UFO01408.5prime Sequence
692 bp (538 high quality bases) assembled on 2008-09-15
> UFO01408.5prime
CAGTCGACATGGCCCAGATACAGACACCGATACCGATTCCAGCCCCCGCG
GAGCCCATTGAAAAGCTCAGCCACCCGCACAGCATTGGCATCCAGTTGCA
GCACAAGGGGATGCCCCATGGCCTGGGCCTGCTGACCACAGTGGCCTCGC
TGCCCCCCAAGTACCGCAGTCGATATCTGAACCTGAAAACCAGGTGCGAA
ATACCGCTGGATCTAACGCTGAAGCTTCCCTCACCACTGCCCAGCAGCGA
TGTGCCCATGGCGGCCACATTCGCGGAGGTCTATAGCGAAAATACGAGTG
CTAGTTCCAGCGAGGTGCAGGGGGAGGTGACCAAGGTGGAGGAGCTGCCG
GTGAAGCCCCCAACACCACCGCAGAGTCCAGCAGGGAAGCGTAAAATTGA
GCCGGGAGAGCTATGACGACGAGCCGGCTAAAATGGCCAAAAAGGAGGAG
GAGGTTCCGGTGGAAACAGTAAAAATCCACACCAGCGAAACCCGTTCAAA
GTGGCAGAATCTGCGCCTAAAACCAAACAAAGGCCCTCCACCTCCTTCGG
GAAAGCCCCTCCCCGCAATAAAAGCCACCCCGCAAAGCTGGGAGTTCGAT
AGGAGGAAGACCAGTTTCCCCCCGTCTTCGGGCACCGGTCATCCCGAACG
GCTTGAGAGACCTCCACCGATTGGATTCGGATGCCAGTACAG
UFO01408.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nerfin-1-RA | 3208 | CG13906-RA | 186..802 | 8..644 | 2660 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 909297..909812 | 8..526 | 2430 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:46:26 has no hits.
UFO01408.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:10 Download gff for
UFO01408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nerfin-1-RA | 177..771 | 1..605 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:53:32 Download gff for
UFO01408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nerfin-1-RA | 150..744 | 1..605 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:36 Download gff for
UFO01408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nerfin-1-RA | 177..771 | 1..605 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:36 Download gff for
UFO01408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 909288..909882 | 1..605 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:10 Download gff for
UFO01408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 909288..909882 | 1..605 | 96 | | Plus |
