Clone UFO01412 Report

Search the DGRC for UFO01412

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:14
Well:12
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptMlp84B-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO01412.5prime Sequence

1097 bp (963 high quality bases) assembled on 2008-09-15

> UFO01412.5prime
CAGTCGACATGCCTTCCTTCCAACCGATCGAGGCCCCCAAGTGTCCGCGC
TGCGGCAAGAGTGTCTACGCTGCCGAAGAGCGTCTGGCTGGCGGCTATGT
ATTCCACAAGAACTGCTTCAAGTGCGGAATGTGCAACAAATCCCTGGACT
CCACCAACTGCACAGAGCACGAGCGCGAGCTCTACTGCAAGACGTGCCAC
GGTCGCAAGTTCGGGCCGAAAGGTTACGGCTTCGGCACTGGAGCTGGCAC
CCTCTCCATGGACAACGGGTCACAGTTCCTGCGCGAGAACGGCGATGTGC
CGTCCGTAAGGAATGGAGCCCGCCTGGAACCCAGGGCTATTGCTCGTGCC
CCCGAAGGTGAGGGCTGTCCTCGTTGCGGTGGCTATGTGTACGCCGCCGA
ACAGATGTTAGCCCGCGGTCGCAGCTGGCACAAGGAGTGCTTCAAGTGCG
GTACCTGCAAGAAGGGTCTGGACTCGATCCTGTGCTGCGAGGCTCCGGAC
AAGAACATCTACTGCAAGGGCTGCTATGCCAAGAAGTTTGGACCCAAGGG
CTATGGTTATGGCCAGGGCGGTGGTGCTCTCCAGTCCGACTGCTATGCTC
ACGACGACGGAGCACCGCAAATCCGTGCCGCCATTGATGTGGACAAGATC
CAGGCCCGTCCGGGTGAGGGTTGCCCACGTTGCGGCGGTGTGGTCTACGC
AGCGGAGCAGAAGCTTTCCAAGGGTCGGGAGTGGCACAAGAGGTGCTTCA
ACTGCAAGGATTGCCACAAGACTCTGGACTCGATCAATGCCAGTGATGGT
CCCGATCGTGATGTGTACTGCCGCACCTGCTACGGCAAGAAGTGGGGACC
ACATGGCTATGGATTCGCATGCGGCTCTGGTTTCCTGCAGACCGATGGCT
TGACCGAGATCAGATCAGCGCCAACAGGCCCTTCTATACCGGGACACCAC
GTCAATTAAGGCCCGTGACGGCGAAGCTGTCCCCGTGCGGAGGAGCCGTA
TTCGCGCGAGCACAGCTGTCAAGGCAAGGGTGTGCCAGATGCTACAACTG
CGCCGACTGCCACGTCATGAACTCGGGTCTTGACTTGCAATGGACCG

UFO01412.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
Mlp84B-RC 3071 CG1019-RC 162..1229 9..1063 4955 98.3 Plus
Mlp84B-RB 2382 CG1019-RB 145..1212 9..1063 4955 98.3 Plus
Mlp84B-RA 2399 CG1019-RA 162..1229 9..1063 4955 98.3 Plus
Mlp84B-RC 3071 CG1019-RC 1114..1301 652..839 205 73.9 Plus
Mlp84B-RB 2382 CG1019-RB 1097..1284 652..839 205 73.9 Plus
Mlp84B-RC 3071 CG1019-RC 1482..1586 732..836 195 79 Plus
Mlp84B-RB 2382 CG1019-RB 1465..1569 732..836 195 79 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7114759..7115759 1005..9 4775 99.4 Minus
2R 25286936 2R 24076718..24076945 672..899 315 75.9 Plus
2R 25286936 2R 24075451..24075586 129..264 245 78.7 Plus
3R 32079331 3R 7114620..7114807 839..652 205 73.9 Minus
3R 32079331 3R 7114335..7114439 836..732 195 79 Minus
2R 25286936 2R 24075245..24075336 34..125 190 80.4 Plus
Blast to na_te.dros performed on 2014-11-28 19:13:06 has no hits.

UFO01412.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:41 Download gff for UFO01412.5prime
Subject Subject Range Query Range Percent Splice Strand
Mlp84B-RA 154..1229 1..1063 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:53:20 Download gff for UFO01412.5prime
Subject Subject Range Query Range Percent Splice Strand
Mlp84B-RB 135..1210 1..1063 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:17 Download gff for UFO01412.5prime
Subject Subject Range Query Range Percent Splice Strand
Mlp84B-RA 154..1229 1..1063 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:17 Download gff for UFO01412.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 7114692..7115767 1..1063 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:41 Download gff for UFO01412.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2940414..2941489 1..1063 98   Minus