UFO01427.5prime Sequence
1149 bp (1032 high quality bases) assembled on 2008-09-15
> UFO01427.5prime
CAGTCGACATGGAAGCAAAGCGCGAGAGAAAGTCATCCCTGGCACCACTT
TCGCCATGTCCAATTCCGGATATTACCGATGACGATTTGGTGAGCATTTC
GGTAAGGGATCTTAATCGGACCCTCAAGATGCGTGGCCTGAACCGCGAGG
AGATCGTTCGGATGAAGCAGCGCCGGAGAACCTTAAAGAATCGCGGATAC
GCAGCCAGTTGCCGCATCAAGAGAATCGAACAGAAGGACGAGCTGGAGAC
TAAGAAGTCGTACGAGTGGACGGAACTGGAGCAGATGCACGAGGACAACG
AGCAGGTGCGCCGCGAGGTGTCCAACTGGAAGAACAAGTACAAGGCGCTG
CTGCAGTTCGCCATCCAGAACGAGATACCCATTCCCAGCGAGCTGGAGGG
CTGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAG
AAGTTGTCCATATTGGCCACGTTTAATCAAAACTGGTGAAACTCACCCAG
GGATTGGCTGAGACGAAAACATATTCTCATAACCCTTTAGGGAAATAGGC
CAGGTTTCACCGTACACGCACATCTTGCGAATATATGTGTAGAACTGCCG
AAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCA
TGAAAACGGTGTAACAGGGTGAACACTATCCCATATCACAGCTCACCGTC
TTTTCATTGCCATACGAATCGGATGACATCATCAGGCGGGCAGAATTGAT
AAGCGATAACTGTGCTATTTCCTACGGCTAAAGGGCAATCCACGCGTAC
UFO01427.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
maf-S-RA | 631 | CG9954-RA | 111..506 | 9..404 | 1980 | 100 | Plus |
maf-S-RB | 646 | CG9954-RB | 158..521 | 41..404 | 1820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20641180..20641543 | 41..404 | 1820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:28 has no hits.
UFO01427.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:54 Download gff for
UFO01427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
maf-S-RA | 103..510 | 1..408 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:54:07 Download gff for
UFO01427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
maf-S-RA | 108..515 | 1..408 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:30 Download gff for
UFO01427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
maf-S-RA | 103..510 | 1..408 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:30 Download gff for
UFO01427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20641181..20641543 | 42..404 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:54 Download gff for
UFO01427.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16528686..16529048 | 42..404 | 100 | == | Plus |