UFO01430.5prime Sequence
1156 bp (1040 high quality bases) assembled on 2008-09-15
> UFO01430.5prime
CAGTCGACATGGAACCGGTGCCCATCCGGCCAAAAGCGCCGGGAGCGAGC
AACCGCGGAGCCCTGCCGCTGGCGGCGAAGAAGCCGGCCAAGAAGCGTAC
GTACCACTGCGGCGTTTGTTTTGCGGAGTTCTCTCGTCATCTGGCCGCCA
AGCGGCACGAGCAGCAGTGCTCCGTCAGGGTGAGGCGTCTTTTCGTCTGC
CCCCACTGCCTGACGCTTTTCGGCGAGGAGGCCCGGCTGGAGCGGCATCG
GGAGCGAAAGCACAACGATGGCCAGTTCCTGTGCCTGCAGTGCGGCAAGA
AGTACGCGTCAGCCACGTTTCTTTACCGTCATGTTGCCAGTTGGCACGGC
CAGCAGTCGCTGTTCTACTGCGACATGTGCACGGACAACTGCAACGACGT
TAAGACCTTTAGCGGGATGCTGGAGCTGCAGGAGCACGCCGAGGAGGTGC
ATCGCCTGCGTACCCTGAAGTCCACGGCCAGTGATGCAGACAGCCAGGTT
GATGAAATGGAGGATCTTGAGATGCTAGAGGAGAACATTGAGAACATACT
GCCCAGCATCGACTGGGACGACGATCTCACCTTTGGCTGGCCCACCGACC
TGGACAAGGAGTCGTGCATTGTGAACGCTAAGCCGAGCGTTTTCGTGTGT
CCCTTCTGCGCCAACGGATTCCCCGGCAGTCTGAGCCTGGTGCGGCACCT
GGAGCAGGTTCACGAACGCAGTGCCCTGGACTGCTGCTACTGTGGCAAGA
GCCATGGCAGCCGAGAAGCCCTGCGGTCCCATCTGCAACGTGTTCACATC
CTCTTGCGCGGTCATGTGTGCGGTATTTGCCAGGCGGACTTCGCCACTGC
TGATCACCTAAAGAAGCACGTTAACAGTCTGCACCTGGACCACCGACCGC
ATCTGTGTCCCACGTGCGGAAAGAGATTCACCCAGCGGTGCCACCTCACC
GATCACATAAAGACGGATCGCGGCCATGGACACGGCACTTACACCTGTGA
ATTCTGCGTGCGGCCCTTCTTCGGGCATCGATCTCGAACGGCATGGGGTG
TGAAGAACATCCGGCAGCTTTCTAGAACATCGTTTGGGCGGCGGGGCCAG
GTAAATTGCTAATACATATCTAATCAAATCCTAATCCCACCTAGCCTAGG
AAATCT
UFO01430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7101-RA | 1454 | CG7101-RA | 73..1128 | 9..1063 | 5180 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18831218..18831797 | 485..1063 | 2745 | 99 | Plus |
| X | 23542271 | X | 18830663..18831143 | 9..489 | 2405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:42:11 has no hits.
UFO01430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:11 Download gff for
UFO01430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 73..1131 | 9..1067 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:54:14 Download gff for
UFO01430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 58..1116 | 9..1067 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:46 Download gff for
UFO01430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7101-RA | 73..1131 | 9..1067 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:46 Download gff for
UFO01430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18830663..18831143 | 9..489 | 100 | -> | Plus |
| X | 18831223..18831804 | 490..1068 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:11 Download gff for
UFO01430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18724696..18725176 | 9..489 | 100 | -> | Plus |
| arm_X | 18725256..18725837 | 490..1068 | 98 | -> | Plus |
