UFO01436.5prime Sequence
607 bp (6 high quality bases) assembled on 2008-09-15
> UFO01436.5prime
CAATCCACATGTATTTACGGAAAACGCTCCTACTGGGTTGCCTTGTTTTG
CTGTTCGGGGGACTCCCGCCTCTCACCTTCCCTGCAACGACCACTACCTT
ATTGGCGGCCATGTCCATCGCAAATCAGGACTTGGAGCGCTACTTTCGAC
CAGGCAACGGCACTCACAGCTTCTCCGGCATGGAAGATCGTTTGCCGTGG
ACGTCTATAACTACGCCTTTCTTAACTGGACATACGTAGAGCACGGTAAC
ATGCTGTGCAACATGGAATTCACCCAACAACAGGCCCGTTACGGAGAGGG
CAAGGTGTTGAACGTAACGGGACGGTTAATTCACATCACCGCCACGGACA
ACTTTAGTGACGATTACCCGTGCACGCCGTACATCCGAGGAACCTTGGGA
GCACCCATACCTGATAAAGGGGAGACATGGATTGCATTGGTGCGACGGGG
CCGCTGCACCTTTGAGGAAAAAGTTAAACATGTCTACCAGCAAAATGCTG
CCGGTGTTATTATTTATAACGACAAGCAAGTAATGCAGCTTGATAATATG
CCTATCAAGGGCACAACAAGAAACATAGCCACCGTTATAACTTATCACAA
CATTGGG
UFO01436.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gol-RE | 3725 | CG2679-RE | 559..1158 | 9..607 | 2735 | 97.2 | Plus |
| gol-RD | 2520 | CG2679-RD | 559..1158 | 9..607 | 2735 | 97.2 | Plus |
| gol-RC | 3193 | CG2679-RC | 559..1158 | 9..607 | 2735 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 25077369..25077931 | 570..9 | 2555 | 97.3 | Minus |
Blast to na_te.dros performed 2014-11-28 21:59:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 8291..8329 | 243..281 | 114 | 76.9 | Plus |
UFO01436.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:24 Download gff for
UFO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gol-RC | 559..1158 | 9..607 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:54:04 Download gff for
UFO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gol-RB | 532..1131 | 9..607 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:54 Download gff for
UFO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gol-RC | 559..1158 | 9..607 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:54 Download gff for
UFO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 25077269..25077306 | 570..607 | 94 | <- | Minus |
| 2R | 25077370..25077931 | 9..569 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:24 Download gff for
UFO01436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20964792..20964829 | 570..607 | 94 | <- | Minus |
| arm_2R | 20964893..20965454 | 9..569 | 97 | | Minus |
