UFO01462.5prime Sequence
1127 bp (1050 high quality bases) assembled on 2008-09-15
> UFO01462.5prime
CAGTCGACATGGATTCCTCTCCTAGCTGTTTACTCTGCATGTGCGAGTAT
CCGGCCATGATGGGGGACTATATAGATGTACACTCCGCGCGCGGCGACCA
ATTGGAGGTGACTACGATCGTCAACCAGCACTTCCCCGTCCAGATCTCCA
AGGAAAGCGACGAAAGGATATGCGGCCGCTGCTGGAAAATCGTCTCAGAC
TTCCACACTTTACACGAGTTCGTCAGTGCAGCGCAGAGCTCTTTACAGGA
AACAAAAGTGGCGCTCATGGAGGATGATCCCCTAACACAGGAAACTACGT
CCTTTCCGGAGATTATAAAACTGGCTACTCAGGAGGAGGAAGGGGTGACG
GAACCACAGGAACTTGGCGGTCGGAACTTCTTTTACCCAGAGATTAAGAT
TGAGGAACATGAATTGGATACTCTTCCCCGCATCGAGATCCTAGAGAGAT
CGGCCAACACCCAGGAAAACCAGGACCAACTTGAGGGTGCAGCCAGACGC
CTTAGGAAGCGTTTGAAGGCAGAGGATGGATCAAGTGTTGACAAGGATAA
GGACGAGGATGGAGTAGAAGAGACTGCAGAACCTGCGCCGCCTAAAAAGC
GACGTGGTCGCCCAAGGAAATCAGACGCTGCCGTTGCCCCGCCCCAAAAA
CCTAAAGAAGACATTCAACTTGACCTTAAGGCAGAAGAGCTTGACGAGTT
CGTAGATGAGGAGACGGACCCTGACTTCTCATGCCTGGTGCCTAGCGATA
ACTCCTCCGAGGACGATGGAGGCAGCGATGGCTTCGACTCAGACTCAGAC
TTTGAACTGGACAATGGAAAGCAAGAGTTTGCCGTGCTGCCAAAAGAACA
GTAGTACGGCCCAAGAAATACAGAAGCGGACGAACCGGCGGAGCCGAAGT
CCGCATGTCCCGCGAACTGCTGGAGCAGCGCAAAAGCAGCAGAAGAATAC
GACGTCATCATCGCAGTTCTTTACCAGCGTGCTGCGTGTGCATCTGCATC
TGCTGGGTGCACAACTTCACGAGATGCACGTCATCACGACTGACCCATCA
AGTGGATCCGGGCTACTGGATGGTGCTCCGGGCCCGCAGGTTCACGCAAC
GCAAATTGCTGGCGGACCCTGTTACTC
UFO01462.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4282-RA | 2393 | CG4282-RA | 147..1261 | 9..1113 | 5045 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16322434..16323545 | 12..1113 | 4630 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:43:04 has no hits.
UFO01462.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:42 Download gff for
UFO01462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4282-RA | 138..1233 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:54:58 Download gff for
UFO01462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4282-RA | 136..1231 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:13 Download gff for
UFO01462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4282-RA | 138..1233 | 1..1084 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:13 Download gff for
UFO01462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16322431..16323517 | 9..1084 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:42 Download gff for
UFO01462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12209936..12211022 | 9..1084 | 97 | | Plus |
