UFO01469.5prime Sequence
1134 bp (877 high quality bases) assembled on 2008-09-15
> UFO01469.5prime
CAGTCGACATGAGCCTGGAAGTGAGCAATATAAACGGGGGAAACGGTACT
CAATTGTCCCACGACAAGCGTGAGCTGCTGTGCCTGCTGAAACTCATCAA
AAAGTACCAGCTGAAGAGCACTGAGGAGCTGCTCTGCCAAGAGGCGAATG
TGAGCAGTGTGGAATTGTCGGAAATCAGCGAAAGTGATGTTCAGCAGGTG
CTGGGCGCAGTTTTGGGAGCTGGCGATGCCAACCGGGAGCGGAAACATGT
CCAATCTCCGGCGCAGGGTCATAAACAGTCCGCGGTGACGGAGGCCAATG
CTGCAGAGGAACTGGCCAAGTTCATCGACGACGACAGCTTTGATGCTCAG
CACTATGAGCAGGCATACAAGGAGCTGCGCACTTTCGTTGAGGACTCCCT
GGACATATACAAGCATGAGCTGTCCATGGTTCTGTACCCAATTCTGGTGC
AGATCTACTTCAAGATCCTCGCCAGTGGACTAAGGGAGAAGGCCAAAGAA
TTCATTGAGAAGTACAAATGCGATCTCGACGGCTACTACATAGAGGGTCT
TTTCAACCTTCTTTTGCTGTCTAAGCCCGAGGAGCTGCTGGAGAATGACC
TCGTAGTAGCCATGGAGCAGGATAAGTTTGTCATTCGCATGTCCAGGGAC
TCGCACTCTCTGTTCAAGCGACACATTCAGGATCGCCGGCAGGAAGTGGT
GGCAGATATTGTTTCCAAGTACTTGCATTTCGACACATACGAGGGCATGG
CGCGCAACAAGCTGCAGTGCGTCGCCACCGCGGGCTCGCACCTCGGAGAG
GCCAAGCGACAGGACAACAAAATGCGGGTGTACTACGGACTGCTCAAGGG
GGTGGACTTTCAGACTCCTGACCCCCTCCTAGCCCGCTGCAGAGGAGGAG
GACGATGATCCGGATGCCCCGGATCGTCCGAAAAGAAAAGCCAAAAAGGA
TCCCTGCTGTCGAAAAGTCCAAGTCGGATCCGAATGCTCCATCATCGACA
GATTCCCCTGCCGGAACTGGAGGATCCGGAAGAGTTGCTAAGCTTAAGCC
TCCCAGGGAAGCAGCAGCGTTTAGCCCTCCACCAGGATTCACTGCCCCTC
TTGCCGTCTTTCTAACGGGTGCCTTAATTTCCCA
UFO01469.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf5-RA | 2362 | CG7704-RA | 69..1177 | 9..1110 | 4920 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10878508..10879605 | 1097..9 | 4650 | 97 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:04:15 has no hits.
UFO01469.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:09 Download gff for
UFO01469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf5-RA | 61..1166 | 1..1097 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:55:07 Download gff for
UFO01469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf5-RA | 58..1163 | 1..1097 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:32 Download gff for
UFO01469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf5-RA | 61..1166 | 1..1097 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:32 Download gff for
UFO01469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10878508..10879612 | 1..1097 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:09 Download gff for
UFO01469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6766013..6767117 | 1..1097 | 96 | | Minus |
