UFO01472.5prime Sequence
1145 bp (1021 high quality bases) assembled on 2008-09-15
> UFO01472.5prime
CAGTCGACATGGCCGTGCAGCTGAAACAGAGCTACCACCACCTGCCCCTG
ACGATCACGCCAATCCTGCAGCAGACGCACCTCCTGCCGCAACAGGCACC
CAATCCACCCCAGCAGCAACCGCAGCAGCCACAGCCGCCGGATCTCACCT
TCCACTGCATGTGCTGTGCGGAGTTCTTCGTCCATCCGCTGGCGCTGTAC
CAGCACATGAACACCCTGCACCCCCATGAGCCGGGCAATGGACAGCAAGA
GCAGGAGAGCCCGGGCGACGAGAGCGAGGACTACAGCTGGATATTCGAGC
CGGTGTGCGAGCTGGCGGAGGATGGCAGCGACTCGTCGGATGGGAGCGCC
TCCTCGGGCTCCGACAGCTCCTCGTCGTCGGACGACGACGATGACGATGA
CGACGACGACAGCAGCAGCTCCAGTTCGAGTTCCAGCAACTCGAGCTCAT
CAAGCAGCTCGGTGCCGACCACCAGCAACTCCAATACCCAGCAGAGCCAG
GAGTCAGTGCAGCCACTTCACGGCCTGGTTGCCGGTCCGGGCTACAATGA
GTTCCAGCTGCAGATGACAGATCCGCGGGAGTCCACCTCCATATTCATGG
TGCAGCCGACCGTAAGCGTCACGCCCTTGCAGCAGCTACTACCACCGGCA
CCCACTGTTAGCCCGGGATTGGGCCTGCAATCGACGCCCATCAAGCGGCG
GCGCGGAAGGCGGAGCAACATCGGTGCACCCGTGATGGATCCAGCGTTGA
ATGGCAACCAGAAATGCTTCCAGTGCACGCACTGCGAGGCGAGCTTTCCC
AACGCCGGCGATCTGTCCAAGCACGTGCGCTCGCACATCACCAACAAGCC
GTTCCAGTGCTCCATCTGCCAGAAGACATTCACGCACATCGGCAGCCTGA
ACACGCACATCCGCATCCACAGCGGCGAGAAGCCGTACAAGTGCGAGCTC
CTGCCCGAAGGCCTTCACGCAGTCCAGCAGCCTGATGGTGCACATGCGCT
CCGCATTCGGTGCGCAAGCCGCATCATGGGTTGCAGTGCGACAAGGAATC
ATCAACTACAGCTCGCTGCTGCTGAACAAGAAAGACGCCACATCCGCCCC
AAGGAAAACGTTTCATCTTGTCGATGCAGCGCGAATCAGGCGAAG
UFO01472.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12299-RA | 3310 | CG12299-RA | 436..1524 | 9..1099 | 5210 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10737888..10738960 | 9..1082 | 5120 | 99.1 | Plus |
Blast to na_te.dros performed 2014-11-28 20:01:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 115..173 | 70..129 | 126 | 70 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9145..9203 | 70..129 | 126 | 70 | Plus |
UFO01472.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:14 Download gff for
UFO01472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12299-RA | 436..1524 | 9..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:54:56 Download gff for
UFO01472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12299-RA | 434..1522 | 9..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:51 Download gff for
UFO01472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12299-RA | 436..1524 | 9..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:51 Download gff for
UFO01472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10737888..10738979 | 9..1103 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:14 Download gff for
UFO01472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10737888..10738979 | 9..1103 | 98 | -> | Plus |
