UFO01506.5prime Sequence
1188 bp (999 high quality bases) assembled on 2008-10-06
> UFO01506.5prime
CAGTCGACATGGGCAAAAAACAGATAAAACAACAACTGGAGACGGCCCAG
AAGACGGGAATCCTGAAGATATCCTTGCAGCGGCTGCAAGAATTCCCACT
GCAGCTAAGGGCCTACCCGAATGTCCTGAAAACCCTGGATCTCTCCGAGA
ATCGCTTCGAACGTGTGCCCGACGAACTGGGCAAGCTGACGCTACTCAAG
CACCTCAATCTAAGCGGAAATCGACTGGTGGAACTCAACGAGGTGGTGGG
CGAACTGGCCAAGCTGGAGGTGCTGTTGCTGATGGACAATATGCTGACAA
GGCTGCCCAAAACCCTGGCCAATTGCACGCACCTGAAGACCGTGAATCTG
AGCAACAATCAGCTGAAGGAGTTCCCCTCCATGCTGTGCGGTCTGAAGCA
GCTGGATGTCCTGGACCTGTCCAGGAACAAGATCACCGATGTGCCCGCCG
ATGTGGGCGGACTGTTTGTGACCGAACTGAACCTTAACCAGAACCAAATA
TCCTCGCTGGCGGAGGAAGTAGCCGATTGTCCCAAGCTGAAGACACTGCG
GCTCGAGGAGAACTGCCTTCAGGCAGCGGCCTTTACACCCAAGATCCTCA
AGGACTCGAAAATCTGCAACCTGGCCGTCGACGGCAATCTGTTCAACTCG
AAACAGTTCACCGATCTCGATGGCTACGATGTCTACATGGAGCGGTATAC
GGCGGTCAGGAAGAAGATGTTCGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCGGCGGCAACCGAGCGTTCTGACCAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCACAGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCCCTCATCGCAGTACTGTTGTATCATAGCATT
CTGCGACTGAAGCCATCACAACGGCATGATGAACTGATCGCCAGCGGCAT
CAGCACCTTTCGCCTGCTATAATATTTGCCCATGGTGAAAACGGGGGCCA
GAGATTGCCAATTGCCAGTTAATCAACTGGGTACTCCCAGAATGCTGAAC
GAAACATTTCCATAACCTTAGGAATAGGCCGGTTCTCG
UFO01506.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3040-RA | 1070 | CG3040-RA | 219..932 | 9..722 | 3555 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6972462..6973175 | 722..9 | 3555 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:48:02 has no hits.
UFO01506.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:58 Download gff for
UFO01506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3040-RA | 228..949 | 1..722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:38:19 Download gff for
UFO01506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3040-RA | 228..949 | 1..722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:28 Download gff for
UFO01506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3040-RA | 211..932 | 1..722 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:28 Download gff for
UFO01506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6972462..6973183 | 1..722 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:58 Download gff for
UFO01506.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6866495..6867216 | 1..722 | 99 | | Minus |
