UFO01512.5prime Sequence
1117 bp (984 high quality bases) assembled on 2008-10-06
> UFO01512.5prime
CAGTCGACATGTCTTGGCTGGGAAGTATGATTCAAAAACTTGGCAGAGCC
ACGCTCCTTGCTGTGGGCGGAAAACCCTTGGCTCCGATGGCATCAACCAG
CTACACCGTGCGGCAGTTATCCCATGCCGAGCGACGAGCACGCGGTCCCA
CTGTGCGGCGCTATGGATATGAGGACAAGATCTTCAAGAGCGGACTACTC
CCCCATGTGGACAATGGACAGAAACTGCCGATGCCGGTGTATCGCCCAAA
GAACGCCTGGTCAAAGAAACGTGCGTTGTTTGGCCAGAACGACTACATCG
ACATCCTGGGCAACGATCGTCTGCATCCAGTCAAGGTGCTCTACTCCCTG
CCATCCTGGCTGCGTGGCGTCTCCGGCAATGAGTACCAGGTGCTTCTCCG
CAAACGTAAGCTGCTCGAGAAGTCCAAGTATCCCATCGCCCGACCCACCA
AGTGGCGGGAAATGGAGAAACGCATCCTCTACTTGTACAAGTTCCTCAAC
CGCAAGACGAAGACGGGCTATTCACATCAGGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTG
TAATTTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGA
TGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTAAAATA
TTTGCCCATGGTGAAAACGGGGGGCGAAGAAGTTGTCCATATTGGCCACG
TTTAAATCAAAACTGGTGAAACTCACCAAGGGATGCTGAACGAAAAACAT
ATTCTTCATAACCCTTAGGAATAGGCAGGTTTCACGTAACCGCCACATCT
GCAAATAATGGTGATAGAACTGCGAATCGTCTTGTATTTCACTCCAGAAA
GCCGAATGAAAACGATC
UFO01512.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL51-RA | 628 | CG13098-RA | 88..610 | 8..530 | 2615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8516771..8517293 | 530..8 | 2615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:30:48 has no hits.
UFO01512.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:46 Download gff for
UFO01512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 82..613 | 1..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:37:06 Download gff for
UFO01512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 79..610 | 1..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:01 Download gff for
UFO01512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 82..613 | 1..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:01 Download gff for
UFO01512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8516771..8517299 | 1..530 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:46 Download gff for
UFO01512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8516771..8517299 | 1..530 | 99 | | Minus |
