UFO01523.5prime Sequence
1182 bp (962 high quality bases) assembled on 2008-10-06
> UFO01523.5prime
CAGTCGACATGTGTTGTAGAACGTTGGAGAAACACAGTGCGAAAAATATT
AAAATGAGTACCGACAGCGCCGAGGAAACGGTGATCCATTCCACTGTTCC
CCATTTGGAGATTAACATATCAAACACCAACATCAGCGGCCAGATTGTTT
TAAACGACTTGCTGCTCATGGAGATGCTCGCCCGGTATCCCTTCCTTATC
ATCCCGCAGGTGGAGCCCAAAATGGACGTTGACTACGACTCCTGGGGTTG
GGATCAGCTGGCCAAGTCCTTTAACCAAAGCTACGAGCACGTTGAGCTGA
GTACTCCGTTCTCCGTAAGTGAACTGAAGCTGCGTTGGGTGAAGCTGCGC
CCGCTGGTCAGAGCCTTGGCCGGTTCCAAAGGGCAAATCCCTGAACCTCT
GTGGCGGGTGATGCACGATGTGCACATTCGCATGCAAGCCCCGAATCCGG
CGGATGTGCCGAAAACCAAGTGTCAGGAGTTTCTTCTCAGTCAGTTGCCT
TTCGTGAAATCTATGGCGCAAGCGGAACGCCGGCATTTAGAAGTGGAGGT
CCTCGCCCTCATCCTGGAGCAAGAGCGCCAAGAGAAAGCTACTCGAAAGC
TGGGTCCTAAGGACCTGGAGACGGTTCAGAGCGAATACGACGAATTTCTT
AAAGCGATACGGGTGAAAGAGCTCCCAGCAGACAATTTACTCAGTCCGGC
CATGGACAGATTCGGCATTAGCCCACACAAAATAAGACCCAATGTCGCAA
GTGCCAATAAAAGAATCAGATATAATAATGCTTGCAAAGGATCAAATGAT
GTCAAAATCAAAATAGAAACAGCTATTGAACCTAAAATTAAAGATACAAC
AAAATGTGACGAACGACCGATAGAAACACCACGCTTCGTTCCTCTTAAAA
GCGCGAAATACTACATTAAAAGTGTCGCATCCGGCTGAGCGAGTGAAGTG
ATGATTATTACCCTAGCTAGAATACGGCGCCTCAAGCGCTACGCTGAAGA
AAGCAGCTTTCTAGAACATCGGTTTGGCCGGCGGCCAGGTAATGGTCATA
TCATAATCATATCTAATCTAATCCAACTAGCTAGGATTCTGCCATGACTA
TGCTGATTCTCACAATAAAAGCCGGGCCACGAGCTCGACAATCGATGGAT
TCTTGAGTCGATCATACGACTCTTCTACGACC
UFO01523.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lhr-RA | 1188 | CG18468-RA | 129..1125 | 9..997 | 4745 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17431160..17432137 | 9..980 | 4615 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:48:30 has no hits.
UFO01523.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:07 Download gff for
UFO01523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lhr-RA | 124..1128 | 1..1001 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:38:27 Download gff for
UFO01523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lhr-RA | 105..1109 | 1..1001 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:45 Download gff for
UFO01523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lhr-RA | 124..1128 | 1..1001 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:45 Download gff for
UFO01523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17431155..17432162 | 1..1003 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:07 Download gff for
UFO01523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13318660..13319667 | 1..1003 | 98 | -> | Plus |
