UFO01525.5prime Sequence
1157 bp (947 high quality bases) assembled on 2008-10-06
> UFO01525.5prime
CAGTCGACATGTACGACCGACTGATGGCCCAATTCGCCCAGTGCAAGCTC
ACTGCGTTAAAGAATGTACAAACTCTGCAGATGATCGCCGGTGAGCGTGA
CAACTACACACAACTAGTTGAACACCACGAAGAAAGTATTGTTTTGGCTA
AAGCGGAAATCGAATCCAGTAAAAAAGAGCTAATCACTGCCAAGCAGATT
CGCAAGAACAAGATGGAGTACGACCTGCTGGCCTCGCTCATCCAGGACCA
ACCGGACCGCAGTGAAACACAGCGACATATTGAGACCATTAGGAGGGAGA
TTGACGACTTGGTGCAAAAGAAGCTAAAGATGGAGCGCAAGTTTCAGAAA
CGACGCAATGACTTCACTTTGCTGATGTACACGATTCACGAGCTGGAACA
GCAGCTGGACCAGGACAGCTCATCCTCGGCATCCTCCTCGTCCAGCGATT
GCGATGCCCGCTCTGAGCCGGACCTAGACGACAATGGGATCATGGAGGTA
AGCGATGAAGACGACGATCTCAACAATAGCACTCCCACAAAGTTCGACGG
AGCCCGCGGCGAGCCCAAATATCACTCAGTCTCTACTGAGGACTCTAAAG
CCATGTCCGTAGAAGAGGACACGGTGCTTGAGCTAAGCATCGACAAAGAT
GAGCACGACGTGGATGTAGCTGTTGCCAATGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCCACTCATCGCAGTACTGTT
GTATCATTAAGCATTCTGCCGACATGCAGGCATCCACAAACGGCATGATG
ACCTGAATCGCCAGCGGCATCAGCACTTGTTTGCCTGGCGTATATATTTG
CCCATGGGGTGAAACGGGGGGCGAAGAAGTGTCATTTGCACGTTAAATCA
ACTGGTACTCCCAGGGATGCTGAACCAACTATTCTCCAATAATCCCTTTT
AAGGACA
UFO01525.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thoc7-RB | 926 | CG17143-RB | 189..861 | 8..680 | 3365 | 100 | Plus |
| thoc7-RA | 929 | CG17143-RA | 192..864 | 8..680 | 3365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 211701..212373 | 680..8 | 3365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:19:45 has no hits.
UFO01525.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:31 Download gff for
UFO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thoc7-RA | 183..870 | 1..688 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:38:46 Download gff for
UFO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thoc7-RB | 180..867 | 1..688 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:23 Download gff for
UFO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thoc7-RA | 183..870 | 1..688 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:23 Download gff for
UFO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 211695..212382 | 1..688 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:31 Download gff for
UFO01525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 211695..212382 | 1..688 | 98 | | Minus |
