UFO01557.5prime Sequence
1224 bp (1045 high quality bases) assembled on 2008-10-06
> UFO01557.5prime
CAGTCGACATGGAGCGCTACAATCGCGTCTATAGAGATCCCGCATCCCCA
CTGACCCCACTCACTCCCCTCTCCACCGAAGCTTTTACATTCGAAGATGT
CACGCCCACTGGAGGCGTTGGCAGGAAGGGTACCGCGAGATACGGACTCT
TTGGAATGCCGAAGAACAATAATCTTACGGTTCCTAACAGTCGACCGGCA
TTGTCCGGGTTAAAACGACTATCGGAATCCACTTTGCCCCGTCGATTTTC
ACAGAAATTTATGCGCACGCGTTCCGTATTTTCGCCCACAAGTCAAAGTA
CCCTTATAAATGGGGAGACCAGGCTACTGGGAGAATCTGGAGATTCGAAA
CTACTGAGAACTAAGAGAGAAGACAGACCAAAGCCGGATATCCGACTGCA
GCAGGAAACGCGGCTGAGGCAGGAGGAATCCAAGTTGAAAAGTGCGCGAA
AGATTAAAGTGGAGGACCCAAGAAGTCCCACTCCCAGTATCCATCATTCA
CGCTATAAGCCCTGCTCCCCGGTGGAGCACCCCACTTTGAGTCCTCGGGT
CAAATCCCTGCTCGATCGCACCGGAAACGCGCATCTCACAGAGCTGTTCA
CGCGCCAGGAGATCGACATCGAGGTGCTCATCCAAATGACCCTGGAGGAC
TTGGCGGCACTGGGCGTTCGCGGCGCCCGGGAGATCCGATTGGCCATGAA
TATTATCCAACTGGCCAAGCAATTCTTCGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGTATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGAGTCCAAGCGAGC
TCGATATCAAATTACGCCCGCCCTGCCACCTCATCGCAGTACTGTTGTAT
TCATTAAGCATTCTGCCGACATGGAAGCATCACAAACGCATGATGACCTG
AATCGCCAGCCGCATCAGCACTTGTCCGCCTTGCGTATATATATTTGCCA
TGGGTGAAACGGGGGCAAGAAAGTGTCCATATTGCAGGTAATCAACTGGT
GACTCTACCAGGGAGTGGCGTGAAACGGAAACACATATGTTCTGTCTATC
TAGTGTATAGGATGCCTCTGATAG
UFO01557.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gnu-RA | 923 | CG5272-RA | 102..821 | 9..728 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14802482..14803175 | 728..35 | 3470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:40:25 has no hits.
UFO01557.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:50 Download gff for
UFO01557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gnu-RA | 96..821 | 1..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:39:46 Download gff for
UFO01557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gnu-RA | 93..818 | 1..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:08 Download gff for
UFO01557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gnu-RA | 96..821 | 1..728 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:08 Download gff for
UFO01557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14802482..14803173 | 37..728 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:50 Download gff for
UFO01557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14795582..14796273 | 37..728 | 100 | <- | Minus |
