UFO01563.5prime Sequence
1159 bp (995 high quality bases) assembled on 2008-10-06
> UFO01563.5prime
CAGTCGACATGCACATCACACGCCTCGCCCTTCGCCAGATTTCGCGCCAA
GTGCAGCTGCATCGCATGTACAGTGCAGCGGCTCCGGCCGCCGCAGTCTC
GGGTGCGGAAAAACTGGTGCCTCCCGCGCCGGAAGGAGCCGCCAAGCCAC
CCAATCCCAAACTGGACTCGATTGTCAACAACATTGCCGCGCTCAATCTC
CTCGAGGTGGCCGAGCTGAGCACCCTGCTCAAACAGAAACTGAACCTGCC
CGAGACCGCATTTGCCCCACAATTCGCCGCTGGGCCGGCACGTGCTGCTC
CCGCCGAGGATGAGGAGGAGGCAGCGCCCAAGAAGGTACAGACCTCCTTC
AAGGTCAAGCTGGTCAAGTTCGACGAAAAGCAGAAGGTGGCGCTGATCAA
GGAGGTGAAGAACCTACTCGAGGGCATGAACCTGGTGCAGGCCAAAAAGT
TCGTCGAGAGCGCACCGACCATCGTTAAGGAGGACATCCCCAAGGAGGAG
GCCGAGAAACTCAAGGAGGCACTGTCCAAGGCGGGCGCCATCATCGAGAT
CGAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAACGGCATGATGAACCTGAACCCCAGCGGCATCAGCAC
CTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAACGGGGGCGAAGAGT
GTCCATATGCCACGTTTAATCAAACTGTGAACTCACCCAAGGAATGCCTG
AACGAAAACATATTCTCATTACCCTTAAGGAATAGGCCAGTTCACCGTAC
CGCCCAATCTGCATATTGTGTAGAACTGCCGAAATCGTCTGATTCCCCTC
CGAACGATGAAACGGTCAGTTGTCTCATGAAGCGGGTTACAAGGTGTAAC
CTTTCCATT
UFO01563.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL12-RA | 738 | CG5012-RA | 101..646 | 9..554 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8956947..8957492 | 9..554 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:53:46 has no hits.
UFO01563.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:25 Download gff for
UFO01563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL12-RA | 94..646 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:03 Download gff for
UFO01563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL12-RA | 93..645 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:24 Download gff for
UFO01563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL12-RA | 94..646 | 1..554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:24 Download gff for
UFO01563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8956940..8957492 | 1..554 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:25 Download gff for
UFO01563.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8950040..8950592 | 1..554 | 99 | == | Plus |
