UFO01572.5prime Sequence
1172 bp (1012 high quality bases) assembled on 2008-10-06
> UFO01572.5prime
CAGTCGACATGTCGCTGAATCCGCAGTACGAGGACATTGGCAAGGGATTT
GTGCAGCAGTACTATGCGATATTCGATGACCCGGCGAATCGGGCGAACGT
GGTTAATTTCTATAGCGCTACCGACTCATTCATGACCTTTGAAGGCCACC
AAATACAGGGGGCACCCAAGATTCTGGAAAAAGTTCAGAGTCTGAGCTTT
CAGAAGATTACCAGAGTGATAACCACAGTGGACTCGCAGCCAACTTTCGA
TGGCGGAGTTCTGATCAACGTCCTTGGAAGACTACAGTGCGATGACGATC
CCCCACATGCCTTCTCGCAGGTCTTTTTCCTGAAGGCCAACGCAGGCACC
TTCTTTGTGGCCCACGACATCTTCCGTCTCAACATCCACAACTCTGCCGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACC
GAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTA
TCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCA
CTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGC
CATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTG
TCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTT
GTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGAT
TGGCTGAGACGAAAAACATATTCTCAATAACCCTTTAGGGAAATAGGCCA
GGTTTTCACCGTACACGCCACATCTTGCGAATATATGTGTAGAAACTGCC
GGAAATCGTCGTGTATCACTCCAGAGCGATGAAAACGTTTCAGGTTGCTC
ATGAAACGGTGTACAGGTGACACTATCCATATCACAGCTCACGTCTTTCA
TGCCATACGACTCGATGGACATCCTCAGGCGGCAGATGGTATAAGGCGAT
TAACTGCTATTTCTTACCGGTCTTAGTAAGGCGTAATATCCAGCTGAACG
GCTTGTATAGAGTACATTAGGA
UFO01572.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ntf-2-RE | 3078 | CG1740-RE | 146..535 | 9..398 | 1950 | 100 | Plus |
| Ntf-2-RA | 755 | CG1740-RA | 146..535 | 9..398 | 1950 | 100 | Plus |
| Ntf-2r-RA | 771 | CG10174-RA | 119..508 | 9..398 | 1515 | 92.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18454767..18455156 | 9..398 | 1515 | 92.6 | Plus |
| X | 23542271 | X | 21038743..21038856 | 285..398 | 570 | 100 | Plus |
| X | 23542271 | X | 21035614..21035722 | 9..117 | 545 | 100 | Plus |
| X | 23542271 | X | 21036536..21036637 | 186..287 | 510 | 100 | Plus |
| X | 23542271 | X | 21036399..21036470 | 117..188 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:38 has no hits.
UFO01572.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:14 Download gff for
UFO01572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntf-2-RA | 138..535 | 1..398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:39:49 Download gff for
UFO01572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntf-2-RA | 133..530 | 1..398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:57 Download gff for
UFO01572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntf-2-RA | 138..535 | 1..398 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:05:57 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:46:14 has no hits.
