UFO01573.5prime Sequence
1180 bp (979 high quality bases) assembled on 2008-10-06
> UFO01573.5prime
CAGTCGACATGAACAATGATGACTTCAAGGTATCCGTGGAGCTCTATTCA
AGCCCCAATGGCGATGGGGAATTCAAGAGGATGGTCATGGATGTGCCGCA
AACTAGCATTTGCGAGTGCTTCAAAAAGTTCTATGTCCAGTTTGTGCAAC
CCTCTCTGAAGACTGGAGAAACCACAAATTTCCCCGTTGTCGACGATGAC
TTTTGCCCAGTGCCCGAAGGCGAATTCTACGTTAAGAACGTCATTTTGAA
TACGCAAGATTGGCCATCGCAGGTGCCTCGAGGGATTGTCAAGGCCATTA
TAACATTCTTCAGTGGTGGCAAAAATGTTGGCGGCCTAATTGTAGAAGTC
AAAATTGAAGATCGACAAAGTGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATG
GTGAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAATCAAAAC
TGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATA
AACCCTTTAGGGAAATAGGCCAGGTTTCACCGTACACGCCACATCTTGCG
ATATATGTGTAGAAACTGCCGGAATCGTCGTTGTATTCCCTCCAGAGCGA
TGAAACGTTTCAGTTTGCTCATGGAAAACGTGTACAAGGTGACCACTATC
CCATATCACCAGCTCCCCGTCTTTCATGCATACGAATTCCGGATGACCAT
TCATCAGCGCAGATTGTGAATTAGGCCGATAAACTGGCTATTTTTCTTAC
GACTTAAAGCGTAATCAGCTAACCGCTGATTTAGTACATGAACACCTGCA
CTGAAAGGTCCCTCAAAAGTGTCTCTTATT
UFO01573.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CheA75a-RA | 699 | CG7313-RA | 190..552 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18252337..18252699 | 9..371 | 1815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:38:48 has no hits.
UFO01573.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:27 Download gff for
UFO01573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 183..552 | 1..371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:24 Download gff for
UFO01573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 183..552 | 1..371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:38 Download gff for
UFO01573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CheA75a-RA | 183..552 | 1..371 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:38 Download gff for
UFO01573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18252330..18252699 | 1..371 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:27 Download gff for
UFO01573.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18245430..18245799 | 1..371 | 99 | == | Plus |
