UFO01575.5prime Sequence
1181 bp (985 high quality bases) assembled on 2008-10-06
> UFO01575.5prime
CAGTCGACATGGAATCTGAAGCTCAAGAACGTACTGCACCTGTATCTGCA
AACAAAAGTGATTCATCAGCGGCACCTGTGCTCAATATATCCGGAAGGGT
CAAGTCAGAATGGAATACACCCCGTATTAGGGGCAAAAAGAAGCCGCCGG
CTGTCTTGGAAGCACCCAAAGTGAATCCGCACACATTTCCAGCGATATTA
AGCAGGATTCTACTGAAGACCAATGCTCCGCCTGCAGCTCCACCGAAGTT
TAATCCAGCCGACGGCACACAGTACCTTTGCTTCCTGTGCCTCGAGAAGC
CGGAGAGTCGAAAGCGCGTCTATCACATGTTCATCACGACTGAAAAGGAG
CTGGGAAGCGACTACGCGCACACCAGGAAGTTGTACGAGAATCGCAAGGA
ATTCATATACACCAATAATATATCCGTGGAAACAGTCTGTGCACGAGCAC
TGTACCGTCGGGTTCAAAAGAAGTTCACAGATGTACAGTGGAACAAGCTG
GGCAACGTTTTCGAGACTGACATGGTCGGACGCAGTGATGTCTGGGGTAT
ATCTAATCGAGTTTACGCTTTGCGTATCGAGGAGCACGAAAGACTATTTA
ATTACATTAAGTTTCTGAGCTCAACGAAGTGCGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGT
TGTAATTCATTAAGCATTCTGCCGAAATGGAAGCCATCACAAAACGGCAT
GATGAACCTGATCCGCCAGCGGCATCAGCACCTTGTCGCTTGCGTATATA
TTTGCCCATGTGAAAACGGGGCGAAGAAGTGTCTATTGCCACGTTAATCA
ACTGTGACTCACCAGGATGCTGAAACGAAAACATATCTCAATACCCTTAG
GGATAGCCAGTCACGTAACCGCCACCTGAAATTTGTTTAAACTTCCGGAA
CTCTCGCTCGGTATATTCCACTTCCGAAACG
UFO01575.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42365-RA | 908 | CG42365-RA | 185..809 | 8..632 | 3125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21666871..21667495 | 8..632 | 3125 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:34 has no hits.
UFO01575.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:46 Download gff for
UFO01575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42365-RA | 185..819 | 8..644 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:26 Download gff for
UFO01575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15675-RB | 125..759 | 8..644 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:53 Download gff for
UFO01575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42365-RA | 185..819 | 8..644 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:53 Download gff for
UFO01575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21666871..21667505 | 8..644 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:46 Download gff for
UFO01575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17554376..17555010 | 8..644 | 99 | == | Plus |
