UFO01583.5prime Sequence
1179 bp (904 high quality bases) assembled on 2008-10-06
> UFO01583.5prime
CAGTCGACATGGCGGCGGTTACCAAGAAGATTAAGCGCGATCCCGCGAAG
AACCCGATGAGGGATCTGCACATCCGCAAACTCTGCCTGAACATCTGCGT
GGGCGAGTCCGGTGACAGGCTGACCCGTGCCGCCAAGGTGCTGGAGCAGC
TGACTGGTCAGCAGCCAGTGTTCTCCAAGGCCCGCTACACGGTCCGTTCG
TTCGGTATTCGCCGTAACGAGAAGATCGCTGTCCACTGCACGGTGCGCGG
CGCCAAGGCTGAGGAGATTCTGGAGCGTGGCCTGAAGGTGCGCGAGTACG
AGCTGCGTCGGGAGAACTTCTCCTCCACCGGCAACTTCGGTTTCGGCATC
CAGGAACACATCGATCTGGGCATCAAGTACGATCCCTCCATCGGTATCTA
TGGTCTGGACTTCTACGTCGTCCTCGGCCGCCCTGGCTACAATGTGAACC
ACAGGAAGCGCAAGTCCGGCACTGTCGGCTTCCAGCACCGCCTCACCAAG
GAGGATGCCATGAAGTGGTTCCAGCAGAAATACGATGGTATCATCTTGAA
CACCAAGAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGC
CCGGCGGCAACCGAGCGTTCTGACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGGAGTCAAGCGAGCTCTAATATCAAATTACGCC
CCGCCCTGCCACTCATCGCAGTACTGTTGTATTTCATTAAGCATCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACTGAATCGCAAGCGGCATC
AGCACTTTGTCCGCCTTGGCGTATAATATTTGCCATGGGTGAAACGGGGG
CGAAGAAGTTGTCCATATTGGCCCACGTTTAATCAACTGGTGAACTCACC
TAGGGATTGCTGAACGAAAACCTTTCTCAAATACCCTTAAGGGAATAGGC
AGCTTCACGTACACGCCCATTCTTGGCGAATAATTGTGTAGACTGCCGAA
ATCGTCTGCTATCACCCGAAGCGATAACCGTCCATTGGCCATGGCAACCG
GTTAACACGGGGGACCAATTCCATTCCAA
UFO01583.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL11-RB | 1017 | CG7726-RB | 78..629 | 9..560 | 2760 | 100 | Plus |
RpL11-RA | 710 | CG7726-RA | 78..629 | 9..560 | 2760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19442799..19443099 | 136..436 | 1505 | 100 | Plus |
2R | 25286936 | 2R | 19442617..19442742 | 14..139 | 630 | 100 | Plus |
2R | 25286936 | 2R | 19443312..19443437 | 435..560 | 630 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:28:47 has no hits.
UFO01583.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:12 Download gff for
UFO01583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL11-RA | 69..629 | 1..560 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:40:11 Download gff for
UFO01583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL11-RA | 62..622 | 1..560 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:12 Download gff for
UFO01583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL11-RA | 69..629 | 1..560 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:12 Download gff for
UFO01583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19442617..19442740 | 14..137 | 100 | -> | Plus |
2R | 19442801..19443098 | 138..435 | 100 | -> | Plus |
2R | 19443313..19443437 | 436..560 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:12 Download gff for
UFO01583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15330122..15330245 | 14..137 | 100 | -> | Plus |
arm_2R | 15330306..15330603 | 138..435 | 100 | -> | Plus |
arm_2R | 15330818..15330942 | 436..560 | 100 | == | Plus |